RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 RPL7AP62424 266 aaKnown RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 ARG2P78540 354 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 LTBQ06643 244 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 PKP1Q13835 747 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 MAN2A1Q16706 1144 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 TUBB8Q3ZCM7 444 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 NKAIN1Q4KMZ8 207 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 ZDHHC20Q5W0Z9 365 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 CES4AQ5XG92 561 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 METRNLQ641Q3 311 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 PLEKHA7Q6IQ23 1121 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 PPP1R2P3Q6NXS1 205 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 TLDC1Q6P9B6 456 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 DCUN1D2Q6PH85 259 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 TMCO3Q6UWJ1 677 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 MEX3BQ6ZN04 569 aaKnown RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 TRAPPC5Q8IUR0 188 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 CREBRFQ8IUR6 639 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 CATSPER1Q8NEC5 780 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.05□□□□□ -1.283e-9■■■■■ 27.5
COPA-207ENST00000545284 MAGEB10Q96LZ2 347 aaPredicted RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 TTC25Q96NG3 672 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 MCEEQ96PE7 176 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 ALPK1Q96QP1 1244 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 TUBGCP2Q9BSJ2 902 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 ZCCHC2Q9C0B9 1178 aaKnown RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 RNF32Q9H0A6 362 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 SLC26A1Q9H2B4 701 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 NDST4Q9H3R1 872 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 MAGEE1Q9HCI5 957 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.05□□□□□ -1.28
COPA-207ENST00000545284 CWC15Q9P013 229 aaKnown RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 KCNN3Q9UGI6 736 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 SLC24A2Q9UI40 661 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 FBXL4Q9UKA2 621 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 NXT1Q9UKK6 140 aaKnown RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 MKL2Q9ULH7 1088 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 CHKBQ9Y259 395 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 MEMO1Q9Y316 297 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 MRPS2Q9Y399 296 aaKnown RBP7.05□□□□□ -1.28
COPA-207ENST00000545284 PCDHGB6Q9Y5F9 930 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 HEBP2Q9Y5Z4 205 aa7.05□□□□□ -1.28
COPA-207ENST00000545284 GSAPA4D1B5 854 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 E9PLN8 166 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 H3BMH7 237 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 POP7O75817 140 aaKnown RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 OR2B3O76000 313 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CBSLP0DN79 551 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CHRNB2P17787 502 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 HLA-DPA1P20036 260 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CBSP35520 551 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 ARL4AP40617 200 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 MTIF2P46199 727 aaKnown RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 ZNF165P49910 485 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 AP2B1P63010 937 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CACNG1Q06432 222 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 ITKQ08881 620 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 XRCC4Q13426 336 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 DPYSL2Q16555 572 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 QPCTQ16769 361 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CA9Q16790 459 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CLEC16AQ2KHT3 1053 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 BOLA3Q53S33 107 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 PPP6R3Q5H9R7 873 aaPredicted RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 ISM2Q6H9L7 571 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 TIGD7Q6NT04 549 aaPredicted RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 KIRREL2Q6UWL6 708 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 MON1BQ7L1V2 547 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 TMC3Q7Z5M5 1100 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 SPPL2CQ8IUH8 684 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 GPR26Q8NDV2 337 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 GPR150Q8NGU9 434 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 SUN3Q8TAQ9 357 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CA5BP1Q8WTZ4 195 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 N4BP2L2Q92802 583 aaPredicted RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 THOC3Q96J01 351 aaKnown RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 VKORC1Q9BQB6 163 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 NDC1Q9BTX1 674 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 SNRNP25Q9BV90 132 aaKnown RBP7.04□□□□□ -1.28
COPA-207ENST00000545284 NT5MQ9NPB1 228 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 SEMA3GQ9NS98 782 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 TXLNGQ9NUQ3 528 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 IL1RAPL1Q9NZN1 696 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 TRIM10Q9UDY6 481 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 CDC23Q9UJX2 597 aa7.04□□□□□ -1.28
COPA-207ENST00000545284 MYO7BQ6PIF6 2116 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 C17orf113A0A1B0GUU1 675 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 H3BRJ5 948 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 MATN3O15232 486 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 ZSCAN9O15535 394 aaPredicted RBP7.03□□□□□ -1.28
COPA-207ENST00000545284 PRAMEF2O60811 474 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 CNOT3O75175 753 aaKnown RBP7.03□□□□□ -1.28
COPA-207ENST00000545284 KLHL18O94889 574 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 HPP00738 406 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 POLR2CP19387 275 aaPredicted RBP7.03□□□□□ -1.28
COPA-207ENST00000545284 UGT1A4P22310 534 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 CCNCP24863 283 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 ARSFP54793 590 aa7.03□□□□□ -1.28
COPA-207ENST00000545284 FOXD4Q12950 439 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms