RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 RNF214Q8ND24 703 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 HM13Q8TCT9 377 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 CPT1BQ92523 772 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 LRFN5Q96NI6 719 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 C19orf43Q9BQ61 176 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 APOL2Q9BQE5 337 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 TLR10Q9BXR5 811 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 TSPY26PQ9H489 355 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 POMT2Q9UKY4 750 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 FARSAQ9Y285 508 aaKnown RBP13.75□□□□□ -0.21
DDX11-228ENST00000545115 PCDHGA9Q9Y5G4 932 aaKnown RBP13.75□□□□□ -0.21
DDX11-228ENST00000545115 COL12A1Q99715 3063 aa13.75□□□□□ -0.21
DDX11-228ENST00000545115 C17orf113A0A1B0GUU1 675 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 STK10O94804 968 aaKnown RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 GP1BBP13224 206 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 POLR2CP19387 275 aaPredicted RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 ITGALP20701 1170 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 CDH3P22223 829 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 CTNNA2P26232 953 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 HADHAP40939 763 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 PGDP52209 483 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 ZNF140P52738 457 aaPredicted RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 ANKRD20A2Q5SQ80 823 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 ANKRD20A1Q5TYW2 823 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 ANKRD20A3Q5VUR7 823 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 CPZQ66K79 652 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 SNX20Q7Z614 316 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 CCDC170Q8IYT3 715 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 NXPE1Q8N323 547 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 LILRA3Q8N6C8 439 aaPredicted RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 TC2NQ8N9U0 490 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 SLC38A9Q8NBW4 561 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 ACVR1CQ8NER5 493 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 OR4E2Q8NGC2 313 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 OR13C4Q8NGS5 318 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 HEXDCQ8WVB3 486 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 PPM1MQ96MI6 270 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 PPP1R2P1Q96PQ5 205 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 COPS8Q99627 209 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 SLC25A23Q9BV35 468 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 ING2Q9H160 280 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 CHST8Q9H2A9 424 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 SYTL2Q9HCH5 934 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 LUC7LQ9NQ29 371 aaKnown RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 ACSS2Q9NR19 701 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 C1GALT1Q9NS00 363 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 TFR2Q9UP52 801 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 EFR3BQ9Y2G0 817 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 PCDHA13Q9Y5I0 950 aa13.74□□□□□ -0.21
DDX11-228ENST00000545115 SPENQ96T58 3664 aaKnown RBP13.74□□□□□ -0.21
DDX11-228ENST00000545115 ARGFXA6NJG6 315 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 SLC9B1P1A6NJY1 282 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 TTLL8A6PVC2 850 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 KCNN4O15554 427 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 PJA2O43164 708 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 RAB40ALP0C0E4 278 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 RBP3P10745 1247 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 ATP1B2P14415 290 aaPredicted RBP13.73□□□□□ -0.21
DDX11-228ENST00000545115 EIF3EP60228 445 aaKnown RBP13.73□□□□□ -0.21
DDX11-228ENST00000545115 TMPRSS15P98073 1019 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 CHAF1BQ13112 559 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 MSLNQ13421 630 aaPredicted RBP13.73□□□□□ -0.21
DDX11-228ENST00000545115 SPA17Q15506 151 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 FBXO38Q6PIJ6 1188 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 DSELQ8IZU8 1212 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 LCN9Q8WX39 176 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 LRRC45Q96CN5 670 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 SRMSQ9H3Y6 488 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 VPS37BQ9H9H4 285 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 SNX7Q9UNH6 387 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 LRRK2Q5S007 2527 aa13.73□□□□□ -0.21
DDX11-228ENST00000545115 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 GSAPA4D1B5 854 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 MEN1O00255 615 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 IFRD1O00458 451 aaPredicted RBP13.72□□□□□ -0.21
DDX11-228ENST00000545115 VPS4BO75351 444 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 MSL3P1P0C860 447 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 PTPN7P35236 360 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 RORAP35398 523 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
DDX11-228ENST00000545115 PTGIRP43119 386 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 ABRQ12979 859 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 GPR33Q49SQ1 333 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 PRAMEF17Q5VTA0 474 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 PAPD7Q5XG87 772 aaKnown RBP13.72□□□□□ -0.21
DDX11-228ENST00000545115 DARS2Q6PI48 645 aaKnown RBP13.72□□□□□ -0.21
DDX11-228ENST00000545115 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 ENDOVQ8N8Q3 282 aaKnown RBP13.72□□□□□ -0.21
DDX11-228ENST00000545115 CCDC110Q8TBZ0 833 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 ADAMTS17Q8TE56 1095 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 CLIP3Q96DZ5 547 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 SPATA13Q96N96 652 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 FERD3LQ96RJ6 166 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 TBL1YQ9BQ87 522 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 NLNQ9BYT8 704 aa13.72□□□□□ -0.21
DDX11-228ENST00000545115 OSBPL8Q9BZF1 889 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms