RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 HLA-DPA1P20036 260 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 PBLDP30039 288 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 ARSEP51690 589 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 ADCY2Q08462 1091 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 SLC10A2Q12908 348 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 ZBTB17Q13105 803 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 IFI16Q16666 785 aaKnown RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 FKBP15Q5T1M5 1219 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 METRNLQ641Q3 311 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 B3GNTL1Q67FW5 361 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 ZNF324BQ6AW86 544 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 TIGD7Q6NT04 549 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 TMEM220Q6QAJ8 160 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 CDHR3Q6ZTQ4 885 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 MRGPRGQ86SM5 289 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 BEND7Q8N7W2 519 aaPredicted RBP9.1□□□□□ -0.95
CHD4-212ENST00000545083 CATSPER1Q8NEC5 780 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 OR4E2Q8NGC2 313 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 FATE1Q969F0 183 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 C12orf66Q96MD2 445 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 ADGRE3Q9BY15 652 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 SLC7A5P2Q9GIP4 190 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 KIR3DX1Q9H7L2 352 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 SYTL2Q9HCH5 934 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 MAGEE1Q9HCI5 957 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 SLC6A20Q9NP91 592 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 CHST11Q9NPF2 352 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 RAD18Q9NS91 495 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 OLAHQ9NV23 265 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 SERTAD3Q9UJW9 196 aa9.1□□□□□ -0.95
CHD4-212ENST00000545083 PCM1Q15154 2024 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 C19orf84I3L1E1 186 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 AGPSO00116 658 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 KCNK1O00180 336 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 BTN3A3O00478 584 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 PCDH17O14917 1159 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A9O60656 530 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 FTLP02792 175 aaPredicted RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 FERP16591 822 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A6P19224 532 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A1P22309 533 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A4P22310 534 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 PRDX3P30048 256 aaKnown RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 GBE1Q04446 702 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 SRSF11Q05519 484 aaKnown RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 AIMP2Q13155 320 aaKnown RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 DPYSL3Q14195 570 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 KRT81Q14533 505 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 CDSNQ15517 529 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 CYP2A13Q16696 494 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 VWA2Q5GFL6 755 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 CCDC122Q5T0U0 273 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 MRPL14Q6P1L8 145 aaKnown RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 FAM180AQ6UWF9 173 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 ZNF808Q8N4W9 903 aaPredicted RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 LILRA3Q8N6C8 439 aaPredicted RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 FAM71BQ8TC56 605 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 TEKT4Q8WW24 435 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 PTERQ96BW5 349 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 BTBD6Q96KE9 485 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 RMDN2Q96LZ7 410 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 TTC25Q96NG3 672 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 TAAR6Q96RI8 345 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 CEP41Q9BYV8 373 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 PITPNM3Q9BZ71 974 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 SPRTNQ9H040 489 aaPredicted RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A7Q9HAW7 530 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A10Q9HAW8 530 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 UGT1A8Q9HAW9 530 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 FAM60AQ9NP50 221 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 IL26Q9NPH9 171 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 SLC22A11Q9NSA0 550 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 MYO1AQ9UBC5 1043 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 DHCR7Q9UBM7 475 aaKnown RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 FAM8A1Q9UBU6 413 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 GPN3Q9UHW5 284 aaPredicted RBP9.09□□□□□ -0.95
CHD4-212ENST00000545083 FBXL4Q9UKA2 621 aa9.09□□□□□ -0.95
CHD4-212ENST00000545083 ACANP16112 2415 aa9.09□□□□□ -0.96
CHD4-212ENST00000545083 ANKRD12Q6UB98 2062 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 TRGV8A0A0C4DH27 118 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 CCDC66A2RUB6 948 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 GSAPA4D1B5 854 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 LGALS16A8MUM7 142 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 BTN3A1O00481 513 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 HBQ1P09105 142 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 GABRA4P48169 554 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 DCDP81605 110 aaKnown RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 PRKAA1Q13131 559 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 PRKD1Q15139 912 aaPredicted RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 NOMO1Q15155 1222 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 TLR1Q15399 786 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 PCSK7Q16549 785 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 DEFB110Q30KQ9 67 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 ATP13A4Q4VNC1 1196 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 FNBP1LQ5T0N5 605 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 GPRC6AQ5T6X5 926 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 AGAP7PQ5VUJ5 663 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 PRAMEF13Q5VWM6 474 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms