RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 IMPACTQ9P2X3 320 aa15.84■□□□□ 0.13
DDX55-212ENST00000544738 ACSL5Q9ULC5 683 aa15.84■□□□□ 0.13
DDX55-212ENST00000544738 PSMD13Q9UNM6 376 aa15.84■□□□□ 0.13
DDX55-212ENST00000544738 AGAP14A8MT82 685 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 TCP11X1B4DZS4 312 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 DNAJB5O75953 348 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 LEPRP48357 1165 aaKnown RBP15.83■□□□□ 0.12
DDX55-212ENST00000544738 MSLNQ13421 630 aaPredicted RBP15.83■□□□□ 0.12
DDX55-212ENST00000544738 MAP7Q14244 749 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 PARP6Q2NL67 630 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 CACHD1Q5VU97 1274 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 IRGCQ6NXR0 463 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 AADACL2Q6P093 401 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 FAM83HQ6ZRV2 1179 aaPredicted RBP15.83■□□□□ 0.12
DDX55-212ENST00000544738 ARHGEF18Q6ZSZ5 1173 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 KLHDC8BQ8IXV7 354 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 OR2L2Q8NH16 312 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 ZFPM2Q8WW38 1151 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 KLHL6Q8WZ60 621 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 DCUN1D1Q96GG9 259 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 FKBPLQ9UIM3 349 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 CRLS1Q9UJA2 301 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 CROTQ9UKG9 612 aa15.83■□□□□ 0.12
DDX55-212ENST00000544738 PIPSLA2A3N6 862 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 CFAP99D6REC4 459 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 DLGAP3O95886 979 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 MTHFD1P11586 935 aaKnown RBP15.82■□□□□ 0.12
DDX55-212ENST00000544738 ITGALP20701 1170 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 PBLDP30039 288 aaPredicted RBP15.82■□□□□ 0.12
DDX55-212ENST00000544738 CA5AP35218 305 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 SEPHS1P49903 392 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 PMS2P54278 862 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 XIAPP98170 497 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 INPP5JQ15735 1006 aaPredicted RBP15.82■□□□□ 0.12
DDX55-212ENST00000544738 GPR33Q49SQ1 333 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 BCL7AQ4VC05 210 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 DENND5AQ6IQ26 1287 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 DET1Q7L5Y6 550 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 SNX20Q7Z614 316 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 TMEM139Q8IV31 216 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 UBXN4Q92575 508 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 LINC00615Q96LM1 132 aaPredicted RBP15.82■□□□□ 0.12
DDX55-212ENST00000544738 OR6C1Q96RD1 312 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 ULBP3Q9BZM4 244 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 TWSG1Q9GZX9 223 aa15.82■□□□□ 0.12
DDX55-212ENST00000544738 IMP3Q9NV31 184 aaKnown RBP15.82■□□□□ 0.12
DDX55-212ENST00000544738 ZFHX3Q15911 3703 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 WIPF3A6NGB9 483 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 PSMD3O43242 534 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 KIF1CO43896 1103 aaKnown RBP15.81■□□□□ 0.12
DDX55-212ENST00000544738 SLC35G4P0C7Q5 338 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 NELFEP18615 380 aaKnown RBP15.81■□□□□ 0.12
DDX55-212ENST00000544738 ZNF140P52738 457 aaPredicted RBP15.81■□□□□ 0.12
DDX55-212ENST00000544738 OLIG2Q13516 323 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 PLCL1Q15111 1095 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 P3H1Q32P28 736 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 C6orf15Q6UXA7 325 aaPredicted RBP15.81■□□□□ 0.12
DDX55-212ENST00000544738 FAM92BQ6ZTR7 304 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 GAS2L3Q86XJ1 694 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 NXPE1Q8N323 547 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 FAM71DQ8N9W8 422 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 OR13C4Q8NGS5 318 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 TCTN2Q96GX1 697 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 C12orf66Q96MD2 445 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 CD180Q99467 661 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 COPS8Q99627 209 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 CCM2Q9BSQ5 444 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 LRRC40Q9H9A6 602 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 SEMA5BQ9P283 1151 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 ERRFI1Q9UJM3 462 aaPredicted RBP15.81■□□□□ 0.12
DDX55-212ENST00000544738 SHANK1Q9Y566 2161 aa15.81■□□□□ 0.12
DDX55-212ENST00000544738 ZNF106Q9H2Y7 1883 aaKnown RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 C17orf113A0A1B0GUU1 675 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 GOLGA6L6A8MZA4 724 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 LDB2O43679 373 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 FTCDO95954 541 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 FGF5P12034 268 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 ATP1B2P14415 290 aaPredicted RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 NDUFS1P28331 727 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 CDC25BP30305 580 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 PGDP52209 483 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 SH3BP2P78314 561 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 KLF1Q13351 362 aaPredicted RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 SPARCL1Q14515 664 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX55-212ENST00000544738 PRR30Q53SZ7 412 aaPredicted RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 KCTD11Q693B1 232 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 BPHLQ86WA6 291 aaPredicted RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 PPP1R3BQ86XI6 285 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 KMT5CQ86Y97 462 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 RASGRP3Q8IV61 690 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 RNF10Q8N5U6 811 aaKnown RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 SIDT2Q8NBJ9 832 aaKnown RBP15.8■□□□□ 0.12
DDX55-212ENST00000544738 GALNT6Q8NCL4 622 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 GPR150Q8NGU9 434 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 HM13Q8TCT9 377 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 MOCOSQ96EN8 888 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 HES6Q96HZ4 224 aa15.8■□□□□ 0.12
DDX55-212ENST00000544738 SLC41A2Q96JW4 573 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms