RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZDHHC18Q9NUE0 388 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 MOCS1Q9NZB8 636 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 ATXN7L1Q9ULK2 861 aaPredicted RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 MED16Q9Y2X0 877 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 ACACBO00763 2458 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 PFDN6O15212 129 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 SLCO2B1O94956 709 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 ERVK-10P10266 1014 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 HOXB3P14651 431 aaPredicted RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 LEPRP48357 1165 aaKnown RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 GBX1Q14549 363 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 RTP5Q14D33 572 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 GLE1Q53GS7 698 aaKnown RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 NKAIN2Q5VXU1 208 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 ZNF549Q6P9A3 640 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 TRMT10BQ6PF06 316 aaKnown RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 WDR74Q6RFH5 385 aaPredicted RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 PIM3Q86V86 326 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 TRIM48Q8IWZ4 208 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 SLC22A15Q8IZD6 547 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 KRT222Q8N1A0 295 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 OTUD6BQ8N6M0 293 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 FBXO36Q8NEA4 188 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 OR4D9Q8NGE8 314 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 OR10G6Q8NH81 332 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 PANX3Q96QZ0 392 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 DPYSL5Q9BPU6 564 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 TSSK1BQ9BXA7 367 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 NRSN2Q9GZP1 204 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 KIR3DX1Q9H7L2 352 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 RDH14Q9HBH5 336 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 IMP3Q9NV31 184 aaKnown RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 DMGDHQ9UI17 866 aaKnown RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 FBXO5Q9UKT4 447 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 CRYL1Q9Y2S2 319 aa18.67■□□□□ 0.58
DDX55-211ENST00000544429 CFAP20Q9Y6A4 193 aaKnown RBP18.67■□□□□ 0.58
DDX55-211ENST00000544429 UBA6A0AVT1 1052 aaPredicted RBP18.66■□□□□ 0.58
DDX55-211ENST00000544429 H3BMM5 538 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 GABRB3P28472 473 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 PLTPP55058 493 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 EIF3BP55884 814 aaKnown RBP18.66■□□□□ 0.58
DDX55-211ENST00000544429 BOP1Q14137 746 aaKnown RBP18.66■□□□□ 0.58
DDX55-211ENST00000544429 AMZ1Q400G9 498 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 TEDDM1Q5T9Z0 273 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 PTRHD1Q6GMV3 140 aaKnown RBP18.66■□□□□ 0.58
DDX55-211ENST00000544429 DUS1LQ6P1R4 473 aaKnown RBP18.66■□□□□ 0.58
DDX55-211ENST00000544429 NAPRTQ6XQN6 538 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 KIAA0408Q6ZU52 694 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 USP53Q70EK8 1073 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 ANKMY2Q8IV38 441 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 VRK3Q8IV63 474 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 CEP112Q8N8E3 955 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 ASZ1Q8WWH4 475 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 ATXN7L3BQ96GX2 97 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 LIN37Q96GY3 246 aaPredicted RBP18.66■□□□□ 0.58
DDX55-211ENST00000544429 FOXP3Q9BZS1 431 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 L2HGDHQ9H9P8 463 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 HEBP2Q9Y5Z4 205 aa18.66■□□□□ 0.58
DDX55-211ENST00000544429 IGHV5-10-1A0A0J9YXX1 117 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 ESYT3A0FGR9 886 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 TRABD2BA6NFA1 517 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 DUX1O43812 170 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 ZNF500O60304 480 aaPredicted RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 NIPSNAP2O75323 286 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 HAUS5O94927 633 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 F7P08709 466 aaPredicted RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 PKMP14618 531 aaKnown RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 NDUFS1P28331 727 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 FMO4P31512 558 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 LIMK2P53671 638 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 INHBCP55103 352 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 TMEM71Q6P5X7 295 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 GSDMBQ8TAX9 411 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 TFGQ92734 400 aaPredicted RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 CFAP36Q96G28 342 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 TMEM74Q96NL1 305 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 FAM129AQ9BZQ8 928 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 TWSG1Q9GZX9 223 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 RAB33BQ9H082 229 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 SEMA6CQ9H3T2 930 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 FBXO6Q9NRD1 293 aaPredicted RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 IARS2Q9NSE4 1012 aaKnown RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 TMEM9Q9P0T7 183 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 DKK4Q9UBT3 224 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 SLC24A2Q9UI40 661 aa18.65■□□□□ 0.58
DDX55-211ENST00000544429 MN1Q10571 1320 aaPredicted RBP18.65■□□□□ 0.58
DDX55-211ENST00000544429 TMX2-CTNND1H3BSU7 103 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 KPNA5O15131 536 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 UBXN7O94888 489 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 C1QAP02745 245 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 C9P02748 559 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 THRAP10827 490 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 ITGB6P18564 788 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 MPP1Q00013 466 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 GUCY2DQ02846 1103 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 MAP9Q49MG5 647 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 ZNF449Q6P9G9 518 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 CNSTQ6PJW8 725 aa18.64■□□□□ 0.57
DDX55-211ENST00000544429 IGF2-ASQ6U949 168 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms