RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 C12orf40Q86WS4 652 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ZNF366Q8N895 744 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 KIAA1958Q8N8K9 716 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 RSPRY1Q96DX4 576 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 HOPXQ9BPY8 73 aaPredicted RBP16.74■□□□□ 0.27
PTPRO-209ENST00000543886 TRIM54Q9BYV2 358 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 KLHL4Q9C0H6 718 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 IL1RL2Q9HB29 575 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ARL15Q9NXU5 204 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 SUN2Q9UH99 717 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 PLXNA2O75051 1894 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 PRORSD1PA6NEY8 169 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 KPNA5O15131 536 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 TULP3O75386 442 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 STAMBPO95630 424 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ENO2P09104 434 aaPredicted RBP16.74■□□□□ 0.27
PTPRO-209ENST00000543886 EPB42P16452 691 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 MSH3P20585 1137 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 CALRP27797 417 aaKnown RBP16.74■□□□□ 0.27
PTPRO-209ENST00000543886 PEX2P28328 305 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 RPIAP49247 311 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 TRAP1Q12931 704 aaKnown RBP16.74■□□□□ 0.27
PTPRO-209ENST00000543886 RCAN2Q14206 197 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ZNF284Q2VY69 593 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 CDKL4Q5MAI5 379 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ERAP2Q6P179 960 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 MBOAT1Q6ZNC8 495 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 UBE2R2Q712K3 238 aaPredicted RBP16.74■□□□□ 0.27
PTPRO-209ENST00000543886 DPPA4Q7L190 304 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 TRAM1L1Q8N609 369 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 HCAR2Q8TDS4 363 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 SAMD11Q96NU1 681 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ZSCAN5AQ9BUG6 496 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 ZIM2Q9NZV7 527 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 MAP10Q9P2G4 905 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 SLC27A6Q9Y2P4 619 aa16.74■□□□□ 0.27
PTPRO-209ENST00000543886 C16orf96A6NNT2 1141 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 CASQ2O14958 399 aaPredicted RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 CLGNO14967 610 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 NUAK1O60285 661 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 MTX2O75431 263 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 STK16O75716 305 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 PLEKHS1Q5SXH7 462 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 Q6ZSR9 355 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 SFRP1Q8N474 314 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 TIFAQ96CG3 184 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 LRGUKQ96M69 825 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 HBEGFQ99075 208 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 RIOK2Q9BVS4 552 aaKnown RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 CD300AQ9UGN4 299 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 PDE4DIPQ5VU43 2346 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 A0A1W2PP18 115 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 AP2A2O94973 939 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 NFATC1O95644 943 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 HIST1H2AGP0C0S8 130 aaPredicted RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 MPC1LP0DKB6 136 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 HIST1H2ADP20671 130 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 POLR2JP52435 117 aaKnown RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 UFM1P61960 85 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 GBX1Q14549 363 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 ABRAXAS2Q15018 415 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 TCAIMQ8N3R3 496 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 BPIFB1Q8TDL5 484 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 HIST1H2AHQ96KK5 128 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 HIST1H2AJQ99878 128 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 GPATCH1Q9BRR8 931 aaKnown RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 H2AFJQ9BTM1 129 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 PCDHAC1Q9H158 963 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 PARVBQ9HBI1 364 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 HEBP1Q9NRV9 189 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 TMEM45AQ9NWC5 275 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 NFKBIL1Q9UBC1 381 aaPredicted RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 MBD1Q9UIS9 605 aaPredicted RBP16.73■□□□□ 0.27
PTPRO-209ENST00000543886 PDE10AQ9Y233 779 aa16.73■□□□□ 0.27
PTPRO-209ENST00000543886 CHD7Q9P2D1 2997 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 CCDC154A6NI56 674 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 LSM1O15116 133 aaKnown RBP16.72■□□□□ 0.27
PTPRO-209ENST00000543886 FTH1P02794 183 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 ELFN1P0C7U0 828 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 EBLN1P0CF75 366 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 MMP12P39900 470 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 CDKL1Q00532 357 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 CREB5Q02930 508 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 EMX2Q04743 252 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 KLC1Q07866 573 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 FOXM1Q08050 763 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 SP140Q13342 867 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 FAM78AQ5JUQ0 283 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 HENMT1Q5T8I9 393 aaKnown RBP16.72■□□□□ 0.27
PTPRO-209ENST00000543886 FAM109BQ6ICB4 259 aaPredicted RBP16.72■□□□□ 0.27
PTPRO-209ENST00000543886 ANO7Q6IWH7 933 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 IRGCQ6NXR0 463 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 TTC23LQ6PF05 361 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 PDSS2Q86YH6 399 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 DDHD1Q8NEL9 900 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 ELMO1Q92556 727 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 LRRC58Q96CX6 371 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 SLC45A3Q96JT2 553 aa16.72■□□□□ 0.27
PTPRO-209ENST00000543886 TEX37Q96LM6 180 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms