RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 LSM1O15116 133 aaKnown RBP16.02■□□□□ 0.15
COL4A1-204ENST00000543140 LINGO3P0C6S8 592 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 HSPA8P11142 646 aaKnown RBP16.02■□□□□ 0.15
COL4A1-204ENST00000543140 MYOGP15173 224 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 POLR2LP62875 67 aaKnown RBP16.02■□□□□ 0.15
COL4A1-204ENST00000543140 CAMK1Q14012 370 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 SERPINA13PQ6UXR4 307 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 VRK3Q8IV63 474 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 CCT7Q99832 543 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 ARL15Q9NXU5 204 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 ABCD2Q9UBJ2 740 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 KLQ9UEF7 1012 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 PRKAG2Q9UGJ0 569 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 ZNHIT2Q9UHR6 403 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 LZTS1Q9Y250 596 aa16.02■□□□□ 0.15
COL4A1-204ENST00000543140 POLR3HQ9Y535 204 aaPredicted RBP16.02■□□□□ 0.15
COL4A1-204ENST00000543140 TCRBV3S1A0A5B6 114 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 LOC730098B7Z3J9 87 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 STAMBPO95630 424 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 FGF19O95750 216 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 CEBPBP17676 345 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 RPIAP49247 311 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PLIN5Q00G26 463 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PDCD4Q53EL6 469 aaKnown RBP16.01■□□□□ 0.15
COL4A1-204ENST00000543140 ZNF648Q5T619 568 aaPredicted RBP16.01■□□□□ 0.15
COL4A1-204ENST00000543140 OR52E8Q6IFG1 317 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PRMT9Q6P2P2 845 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 ISLR2Q6UXK2 745 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 Q6ZVL8 140 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 AMIGO2Q86SJ2 522 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 SPPL2CQ8IUH8 684 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 MTFMTQ96DP5 389 aaKnown RBP16.01■□□□□ 0.15
COL4A1-204ENST00000543140 TMEM74Q96NL1 305 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 LRRC3BQ96PB8 259 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 HEPHQ9BQS7 1158 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 TBC1D14Q9P2M4 693 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 K7EPI3 171 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 ARHGEF15O94989 841 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 OR56A5P0C7T3 313 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 SLC2A4P14672 509 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 ETV3P41162 512 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 HMGCS1Q01581 520 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 TLR1Q15399 786 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 SLC2A7Q6PXP3 512 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PHC3Q8NDX5 983 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 ADCY4Q8NFM4 1077 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
COL4A1-204ENST00000543140 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 CANT1Q8WVQ1 401 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PPWD1Q96BP3 646 aaKnown RBP16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PIF1Q9H611 641 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 INTS7Q9NVH2 962 aaKnown RBP16.01■□□□□ 0.15
COL4A1-204ENST00000543140 PDE10AQ9Y233 779 aa16.01■□□□□ 0.15
COL4A1-204ENST00000543140 ZFC3H1O60293 1989 aaKnown RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 EEDO75530 441 aaKnown RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 CTSLP07711 333 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 GRIK2Q13002 908 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 SLC44A4Q53GD3 710 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 PRSS36Q5K4E3 855 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 CYP20A1Q6UW02 462 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 AHI1Q8N157 1196 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 BEND7Q8N7W2 519 aaPredicted RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 EME1Q96AY2 570 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 MRGPRX3Q96LB0 322 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 PCDH12Q9NPG4 1184 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 ZIM2Q9NZV7 527 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 PCDHA9Q9Y5H5 950 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 IGLV3-16A0A075B6K0 115 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 FAM234BA2RU67 622 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 XYLBO75191 536 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 TIPRLO75663 272 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 STK16O75716 305 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 ATP1B2P14415 290 aaPredicted RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 EPB42P16452 691 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 AOAHP28039 575 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 DGKQP52824 942 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 RPL38P63173 70 aaKnown RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 EMX2Q04743 252 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 PRKG2Q13237 762 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 PDK3Q15120 406 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 NRF1Q16656 503 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 TCEAL5Q5H9L2 206 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 COQ5Q5HYK3 327 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 RNF220Q5VTB9 566 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 BRAT1Q6PJG6 821 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 UBE2R2Q712K3 238 aaPredicted RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 TICAM1Q8IUC6 712 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 OR2T34Q8NGX1 318 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 OR2T3Q8NH03 318 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 ITFG1Q8TB96 612 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 TMEM125Q96AQ2 219 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 ULK4Q96C45 1275 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 FAM83DQ9H4H8 585 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 ACTL8Q9H568 366 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 PKD2L2Q9NZM6 624 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 LEF1Q9UJU2 399 aaPredicted RBP16■□□□□ 0.15
COL4A1-204ENST00000543140 AURKCQ9UQB9 309 aa16■□□□□ 0.15
COL4A1-204ENST00000543140 CROCCQ5TZA2 2017 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms