RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 RBL1P28749 1068 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 KPNA2P52292 529 aaKnown RBP16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 CHAF1BQ13112 559 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 GPS2Q13227 327 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 IL10RAQ13651 578 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 CPZQ66K79 652 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 ZNF449Q6P9G9 518 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 BBS12Q6ZW61 710 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 CPT1CQ8TCG5 803 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 HM13Q8TCT9 377 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 NAT14Q8WUY8 206 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 LCN9Q8WX39 176 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 RMDN2Q96LZ7 410 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 LRFN5Q96NI6 719 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 TLR10Q9BXR5 811 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 SLC7A5P2Q9GIP4 190 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 CHST8Q9H2A9 424 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 SRMSQ9H3Y6 488 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 GOLPH3Q9H4A6 298 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 LUC7LQ9NQ29 371 aaKnown RBP16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 C1GALT1Q9NS00 363 aa16.95■□□□□ 0.3
PPP1CA-210ENST00000542876 BLACEA4D250 179 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 SLC9B1P1A6NJY1 282 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 MEN1O00255 615 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 IFRD1O00458 451 aaPredicted RBP16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 RAB40ALP0C0E4 278 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 ITGALP20701 1170 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 HADHAP40939 763 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 PREPP48147 710 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 CAPRIN2Q6IMN6 1127 aaKnown RBP16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 FBXO38Q6PIJ6 1188 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 RANBP10Q6VN20 620 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 DAAM2Q86T65 1068 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 CDKL3Q8IVW4 592 aaPredicted RBP16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 GALNT11Q8NCW6 608 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 PPP1R2P1Q96PQ5 205 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 FERD3LQ96RJ6 166 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 COPS8Q99627 209 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 APOL2Q9BQE5 337 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 VPS37BQ9H9H4 285 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 POMT2Q9UKY4 750 aa16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 RP1L1Q8IWN7 2480 aaPredicted RBP16.94■□□□□ 0.3
PPP1CA-210ENST00000542876 USP9YO00507 2555 aaPredicted RBP16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 CCDC66A2RUB6 948 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 AGFG2O95081 481 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 CYP2A7P20853 494 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 MARCKSL1P49006 195 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 PRLHRP49683 370 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 COPS2P61201 443 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 TMPRSS15P98073 1019 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 PLEKHS1Q5SXH7 462 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 FHL5Q5TD97 284 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 C11orf63Q6NUN7 778 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 ZNF517Q6ZMY9 492 aaPredicted RBP16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 SNX20Q7Z614 316 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 DSELQ8IZU8 1212 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 NXPE1Q8N323 547 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 ENDOVQ8N8Q3 282 aaKnown RBP16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 SLC38A9Q8NBW4 561 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 PPM1MQ96MI6 270 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 PSMG3-AS1Q96PY0 264 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 NLNQ9BYT8 704 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 C10orf88Q9H8K7 445 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 ACTR5Q9H9F9 607 aaPredicted RBP16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 SERTAD3Q9UJW9 196 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 ZNF451Q9Y4E5 1061 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 PCDHGB7Q9Y5F8 929 aa16.93■□□□□ 0.3
PPP1CA-210ENST00000542876 C17orf113A0A1B0GUU1 675 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 TMEM150CB9EJG8 249 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 DDX3YO15523 660 aaKnown RBP16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 TMEM63AO94886 807 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 ATP1B2P14415 290 aaPredicted RBP16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 PSMB4P28070 264 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 ADRA1AP35348 466 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 PTGIRP43119 386 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 XIAPP98170 497 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 LAMB3Q13751 1172 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 SPA17Q15506 151 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 NADK2Q4G0N4 442 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 ANKRD20A2Q5SQ80 823 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 ANKRD20A1Q5TYW2 823 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 ANKRD20A3Q5VUR7 823 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 DARS2Q6PI48 645 aaKnown RBP16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 HOOK3Q86VS8 718 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 OR13C4Q8NGS5 318 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 ACTL9Q8TC94 416 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 FAM96AQ9H5X1 160 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 MLXIPLQ9NP71 852 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 TCFL5Q9UL49 500 aa16.92■□□□□ 0.3
PPP1CA-210ENST00000542876 AGAP14A8MT82 685 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 KCNN4O15554 427 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 SGTAO43765 313 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 DPM1O60762 260 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 LCA5LO95447 670 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 GNLYP22749 145 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 PRDX3P30048 256 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 CETN2P41208 172 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms