RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RPS24P62847 133 aaKnown RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 KRT83P78385 493 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ECT2LQ008S8 904 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 CREB5Q02930 508 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZBTB16Q05516 673 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 KLHL30Q0D2K2 578 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 LMAN2Q12907 356 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ENPP2Q13822 863 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZNF234Q14588 700 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM95Q3KNT9 176 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZSCAN23Q3MJ62 389 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 TUBB8Q3ZCM7 444 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 MANEALQ5VSG8 457 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 NADSYN1Q6IA69 706 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ACAD10Q6JQN1 1059 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 FBXL22Q6P050 247 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 DCUN1D2Q6PH85 259 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 KIAA1324Q6UXG2 1013 aaKnown RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 MMS22LQ6ZRQ5 1243 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 STRADAQ7RTN6 431 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 APTXQ7Z2E3 356 aaKnown RBP5.45□□□□□ -1.54
CPSF7-220ENST00000541963 RABEPKQ7Z6M1 372 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ADIPOR2Q86V24 386 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 LUZP1Q86V48 1076 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SFTPA1Q8IWL2 248 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 OR2T3Q8NH03 318 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 OLIG1Q8TAK6 271 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SLC20A1Q8WUM9 679 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 NT5C3BQ969T7 300 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SIPA1Q96FS4 1042 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 VCPIP1Q96JH7 1222 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 HAPLN3Q96S86 360 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ACOX2Q99424 681 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 NCAPGQ9BPX3 1015 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 C11orf70Q9BRQ4 267 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ARRDC1-AS1Q9H2J1 176 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 RETREG1Q9H6L5 497 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ZDHHC4Q9NPG8 344 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ITM2CQ9NQX7 267 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SEMA4GQ9NTN9 838 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ARHGEF38Q9NXL2 777 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 AIPL1Q9NZN9 384 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 LUZP4Q9P127 313 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SLC25A13Q9UJS0 675 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 VANGL2Q9ULK5 521 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 CLEC4EQ9ULY5 219 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 SCML1Q9UN30 329 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 NCKAP1Q9Y2A7 1128 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.45□□□□□ -1.544e-11■■□□□ 12.6
CPSF7-220ENST00000541963 HS3ST4Q9Y661 456 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 WDFY4Q6ZS81 3184 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 KIAA1549LQ6ZVL6 1849 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 MUC6Q6W4X9 2439 aa5.45□□□□□ -1.54
CPSF7-220ENST00000541963 ANTXRLA6NF34 631 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 AQP12BA6NM10 295 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 LRRC53A6NM62 1247 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PPM1DO15297 605 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ZSCAN9O15535 394 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 SPDEFO95238 335 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ADCY5O95622 1261 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 DNTTP04053 509 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 RHOCP08134 193 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ITGA2BP08514 1039 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ITGAMP11215 1152 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 GZMAP12544 262 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 HSD3B1P14060 373 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 HGFP14210 728 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 GNSP15586 552 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PPP3CBP16298 524 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 NPPBP16860 134 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 CD70P32970 193 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 MPLP40238 635 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 CSKP41240 450 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PTPN9P43378 593 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 SGSHP51688 502 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PLK1P53350 603 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 AIF1P55008 147 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 GSCP56915 257 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PITX1P78337 314 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 BLOC1S1P78537 153 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 CCDC15Q0P6D6 951 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 FOXO1Q12778 655 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PUM1Q14671 1186 aaKnown RBP eCLIP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 FUT11Q495W5 492 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 TTC31Q49AM3 519 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 C5orf22Q49AR2 442 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 AASDHQ4L235 1098 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 C2CD6Q53TS8 623 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 WDR45BQ5MNZ6 344 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ATPAF1Q5TC12 328 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 ABHD17BQ5VST6 288 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 LYSMD4Q5XG99 296 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 PMS2CLQ68D20 193 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 TMEM215Q68D42 235 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 DNAJC24Q6P3W2 148 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 KLHL17Q6TDP4 642 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 IRF2BP2Q7Z5L9 587 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 SETD3Q86TU7 594 aaPredicted RBP5.44□□□□□ -1.54
CPSF7-220ENST00000541963 DTX2Q86UW9 622 aa5.44□□□□□ -1.54
CPSF7-220ENST00000541963 IZUMO1Q8IYV9 350 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms