RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CCDC188H7C350 402 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 DDX3XO00571 662 aaKnown RBP eCLIP9.5□□□□□ -0.891e-6■□□□□ 8.4
CHFR-220ENST00000541817 ZNHIT1O43257 154 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 CEP104O60308 925 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 PRAMEF11O60813 436 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 KLF7O75840 302 aaPredicted RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 JCHAINP01591 159 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 TMEM253P0C7T8 217 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 BRAFP15056 766 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 ARCN1P48444 511 aaKnown RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 YBEYP58557 167 aaPredicted RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 SLC7A5Q01650 507 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 SLC9A5Q14940 896 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 MTFR2Q6P444 385 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 CRTC3Q6UUV7 619 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 BPHLQ86WA6 291 aaPredicted RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 PHYKPLQ8IUZ5 450 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 ACTRT1Q8TDG2 376 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 NUDT8Q8WV74 236 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHFR-220ENST00000541817 NR4A3Q92570 626 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 CAVIN3Q969G5 261 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 C18orf8Q96DM3 657 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 MS4A14Q96JA4 679 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 SLC39A8Q9C0K1 460 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 METTL5Q9NRN9 209 aaKnown RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 SEPT11Q9NVA2 429 aaKnown RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 TNFRSF10DQ9UBN6 386 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 DMGDHQ9UI17 866 aaKnown RBP9.5□□□□□ -0.89
CHFR-220ENST00000541817 TMEM59LQ9UK28 342 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 NENFQ9UMX5 172 aa9.5□□□□□ -0.89
CHFR-220ENST00000541817 UBA6A0AVT1 1052 aaPredicted RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 WASH4PA8MWX3 477 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 PGRMC1O00264 195 aaKnown RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 SYF2O95926 243 aaKnown RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 CYP2A6P11509 494 aaPredicted RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 ZNF8P17098 575 aaPredicted RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 PCSK6P29122 969 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 PAPOLAP51003 745 aaKnown RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 SMSP52788 366 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 DRG2P55039 364 aaKnown RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 ADAM8P78325 824 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 HSD11B2P80365 405 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 TRAF2Q12933 501 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SSPNQ14714 243 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 PPP2R5EQ16537 467 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 PARP15Q460N3 678 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 CCDC14Q49A88 953 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 B3GNTL1Q67FW5 361 aaPredicted RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 LRRC66Q68CR7 880 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 CLEC9AQ6UXN8 241 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 PPP1R32Q7Z5V6 425 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 DAAM2Q86T65 1068 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 ZDHHC17Q8IUH5 632 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 GSPT2Q8IYD1 628 aaKnown RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 D2HGDHQ8N465 521 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 OR1L3Q8NH93 324 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 EXD1Q8NHP7 514 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 DNAJB8Q8NHS0 232 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SLC30A5Q8TAD4 765 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 RXFP2Q8WXD0 754 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 ARSGQ96EG1 525 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 LRFN5Q96NI6 719 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 KRT12Q99456 494 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 AGPAT1Q99943 283 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 NDC1Q9BTX1 674 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SLC7A5P2Q9GIP4 190 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 ACTR5Q9H9F9 607 aaPredicted RBP9.49□□□□□ -0.89
CHFR-220ENST00000541817 SLC40A1Q9NP59 571 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SOHLH2Q9NX45 425 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 KCTD5Q9NXV2 234 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SMARCAL1Q9NZC9 954 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SEMA5BQ9P283 1151 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 ATXN10Q9UBB4 475 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 SEC14L3Q9UDX4 400 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 EPHA6Q9UF33 1036 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 CSPG4Q6UVK1 2322 aa9.49□□□□□ -0.89
CHFR-220ENST00000541817 ANKRD62A6NC57 917 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 FADS2P1A8MWK0 482 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 PMM2O15305 246 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 KLHL41O60662 606 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 CNOT3O75175 753 aaKnown RBP9.48□□□□□ -0.89
CHFR-220ENST00000541817 KLHL18O94889 574 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 F10P00742 488 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 CBSLP0DN79 551 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 MYBL2P10244 700 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 FOSL1P15407 271 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 CBSP35520 551 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 GYS2P54840 703 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 SOX8P57073 446 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 SNX16P57768 344 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 GUCY2DQ02846 1103 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 PTSQ03393 145 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 TLR1Q15399 786 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 CYP2A13Q16696 494 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 C1orf189Q5VU69 101 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 FCRL6Q6DN72 434 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 IGFL2Q6UWQ7 119 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 SLFN11Q7Z7L1 901 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms