RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 OR13C4Q8NGS5 318 aa23.35■■□□□ 1.33
LEMD3-203ENST00000541171 CLIP3Q96DZ5 547 aa23.35■■□□□ 1.33
LEMD3-203ENST00000541171 FERD3LQ96RJ6 166 aa23.35■■□□□ 1.33
LEMD3-203ENST00000541171 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.35■■□□□ 1.33
LEMD3-203ENST00000541171 MACROD2A1Z1Q3 448 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 GSAPA4D1B5 854 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 KLHL33A6NCF5 533 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 C5orf60A6NFR6 353 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 APOC4-APOC2K7ER74 178 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 APOC2P02655 101 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 RALBP11234 206 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 GNLYP22749 145 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 PSMB4P28070 264 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 PTGIRP43119 386 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 HADHBP55084 474 aaKnown RBP23.34■■□□□ 1.33
LEMD3-203ENST00000541171 XIAPP98170 497 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 NADK2Q4G0N4 442 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 RANBP10Q6VN20 620 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 ENDOVQ8N8Q3 282 aaKnown RBP23.34■■□□□ 1.33
LEMD3-203ENST00000541171 RNF214Q8ND24 703 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 CPT1CQ8TCG5 803 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 LCN9Q8WX39 176 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 CPT1BQ92523 772 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 LINC00615Q96LM1 132 aaPredicted RBP23.34■■□□□ 1.33
LEMD3-203ENST00000541171 CCM2Q9BSQ5 444 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 SRMSQ9H3Y6 488 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 FANCEQ9HB96 536 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 LRRC4CQ9HCJ2 640 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 SNX7Q9UNH6 387 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 BTRCQ9Y297 605 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 HEBP2Q9Y5Z4 205 aa23.34■■□□□ 1.33
LEMD3-203ENST00000541171 CCDC66A2RUB6 948 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 MEN1O00255 615 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 PYGMP11217 842 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 ADRA1AP35348 466 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 GSDMDP57764 484 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 PRPSAP1Q14558 356 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 PLEKHS1Q5SXH7 462 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 FAM69BQ5VUD6 431 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 IZUMO3Q5VZ72 239 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 CARFQ8N187 725 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 HM13Q8TCT9 377 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 PSMG3-AS1Q96PY0 264 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 NRTNQ99748 197 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 FAM118BQ9BPY3 351 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 FERMT1Q9BQL6 677 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 LATS2Q9NRM7 1088 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 POMT2Q9UKY4 750 aa23.33■■□□□ 1.33
LEMD3-203ENST00000541171 AAR2Q9Y312 384 aaKnown RBP23.33■■□□□ 1.33
LEMD3-203ENST00000541171 USP9YO00507 2555 aaPredicted RBP23.33■■□□□ 1.32
LEMD3-203ENST00000541171 TMEM150CB9EJG8 249 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 CCL22O00626 93 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 CRTAMO95727 393 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 PREPP48147 710 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 OTUD4Q01804 1114 aaKnown RBP23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ABRQ12979 859 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ANKRD20A2Q5SQ80 823 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ANKRD20A1Q5TYW2 823 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ANKRD20A3Q5VUR7 823 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ZNF517Q6ZMY9 492 aaPredicted RBP23.32■■□□□ 1.32
LEMD3-203ENST00000541171 DSELQ8IZU8 1212 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ACVR1CQ8NER5 493 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 OR1L3Q8NH93 324 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ACTL9Q8TC94 416 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 ULK4Q96C45 1275 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 COPS8Q99627 209 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 KLHL25Q9H0H3 589 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 C1GALT1Q9NS00 363 aa23.32■■□□□ 1.32
LEMD3-203ENST00000541171 PCDHGA9Q9Y5G4 932 aaKnown RBP23.32■■□□□ 1.32
LEMD3-203ENST00000541171 USP9XQ93008 2570 aaPredicted RBP23.32■■□□□ 1.32
LEMD3-203ENST00000541171 CFAP99D6REC4 459 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 ATP1B2P14415 290 aaPredicted RBP23.31■■□□□ 1.32
LEMD3-203ENST00000541171 ITGALP20701 1170 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 CTNNA2P26232 953 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 PRLHRP49683 370 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 TBX2Q13207 712 aaPredicted RBP23.31■■□□□ 1.32
LEMD3-203ENST00000541171 SPARCL1Q14515 664 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 C11orf63Q6NUN7 778 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 MICALCLQ6ZW33 695 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 CDKL3Q8IVW4 592 aaPredicted RBP23.31■■□□□ 1.32
LEMD3-203ENST00000541171 NXPE1Q8N323 547 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 PHC3Q8NDX5 983 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 LRFN5Q96NI6 719 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 SLC7A5P2Q9GIP4 190 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 PCDHA13Q9Y5I0 950 aa23.31■■□□□ 1.32
LEMD3-203ENST00000541171 SPENQ96T58 3664 aaKnown RBP23.3■■□□□ 1.32
LEMD3-203ENST00000541171 BTN3A3O00478 584 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 KCNN4O15554 427 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 AGFG2O95081 481 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 RAB40ALP0C0E4 278 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 CYP2A7P20853 494 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 PRDX3P30048 256 aaKnown RBP23.3■■□□□ 1.32
LEMD3-203ENST00000541171 LMAN1P49257 510 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 EIF3EP60228 445 aaKnown RBP23.3■■□□□ 1.32
LEMD3-203ENST00000541171 DARS2Q6PI48 645 aaKnown RBP23.3■■□□□ 1.32
LEMD3-203ENST00000541171 SNX20Q7Z614 316 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 GALNT11Q8NCW6 608 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 CCDC110Q8TBZ0 833 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 ADAMTS17Q8TE56 1095 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 TSPY26PQ9H489 355 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms