RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CYP2C18P33260 490 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 TMBIM6P55061 237 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 OXCT1P55809 520 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 TSPY1Q01534 308 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 OCA2Q04671 838 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 EMX1Q04741 257 aaPredicted RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 GRSF1Q12849 480 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 SERINC3Q13530 473 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAM98BQ52LJ0 330 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RNF175Q8N4F7 328 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RHEBL1Q8TAI7 183 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 CD200R1Q8TD46 325 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 RAB2BQ8WUD1 216 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRUB1Q8WWH5 349 aaKnown RBP10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC35B4Q969S0 331 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 SERPINB11Q96P15 392 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 BRINP2Q9C0B6 783 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
CDC42SE1-207ENST00000540998 NLRC5Q86WI3 1866 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 FAM92AA1XBS5 289 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 LCHNA4D1U4 455 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 A6NL46 340 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR7A17O14581 309 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 LRATO95237 230 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 NADKO95544 446 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 BMP4P12644 408 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 GGT1P19440 569 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 PBX3P40426 434 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SUOXP51687 545 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SGSHP51688 502 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC14A1Q13336 389 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 AASDHQ4L235 1098 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 PDCD4Q53EL6 469 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 TAF2Q6P1X5 1199 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 LKAAEAR1Q8TD35 194 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 BRSK1Q8TDC3 778 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 NETO1Q8TDF5 533 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLC39A13Q96H72 371 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 BOCQ9BWV1 1114 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 DERL2Q9GZP9 239 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 RIBC2Q9H4K1 309 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 ATP13A3Q9H7F0 1226 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 TMEM248Q9NWD8 314 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SLCO3A1Q9UIG8 710 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 PADI3Q9ULW8 664 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 PIKFYVEQ9Y2I7 2098 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 VCANP13611 3396 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 HAS3O00219 553 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 LSM1O15116 133 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 GSTT2P0CG29 244 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 GSTT2BP0CG30 244 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 CTPS1P17812 591 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 PSMB9P28065 219 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 THPOP40225 353 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 TMED10P49755 219 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF135P52742 658 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 FOXM1Q08050 763 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 VAC14Q08AM6 782 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 GTF2H3Q13889 308 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 CRY1Q16526 586 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 IRAK1BP1Q5VVH5 260 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 TMEM53Q6P2H8 277 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 Q6ZPB1 254 aaPredicted RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 CEP68Q76N32 757 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 GOLGA7Q7Z5G4 137 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SPATA19Q7Z5L4 167 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 MCOLN3Q8TDD5 553 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 HTRA1Q92743 480 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 ADAM2Q99965 735 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 AMBNQ9NP70 447 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SMPD4Q9NXE4 827 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 TRMT6Q9UJA5 497 aaKnown RBP10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 GNPTGQ9UJJ9 305 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 POU2F3Q9UKI9 436 aa10.19□□□□□ -0.78
CDC42SE1-207ENST00000540998 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 E5RI56 91 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 hCG_2039718K7EN88 272 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ANKRD28O15084 1053 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SERPINA1P01009 418 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 GSTM2P28161 218 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TTKP33981 857 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SEPHS1P49903 392 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ZNF140P52738 457 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 PPP2R2BQ00005 443 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 CDC42EP1Q00587 391 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 SOWAHCQ53LP3 525 aaPredicted RBP10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 NIPAL1Q6NVV3 410 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 C16orf59Q7L2K0 433 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 OR56A4Q8NGH8 313 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 GIPC2Q8TF65 315 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 RHBDF1Q96CC6 855 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 NODALQ96S42 347 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 INPP5KQ9BT40 448 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 OSBPL10Q9BXB5 764 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 MRGBPQ9NV56 204 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 ELOVL2Q9NXB9 296 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 MARCH2Q9P0N8 246 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 TLR6Q9Y2C9 796 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 LOC100130705A0A1B0GUX0 176 aa10.18□□□□□ -0.78
CDC42SE1-207ENST00000540998 MYO1GB0I1T2 1018 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms