RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 TM9SF3Q9HD45 589 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NECTIN3Q9NQS3 549 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TAS2R7Q9NYW3 318 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NDUFAF4Q9P032 175 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 EGFL7Q9UHF1 273 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 MAB21L2Q9Y586 359 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TEX264Q9Y6I9 313 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CHST10O43529 356 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 HPRP00739 348 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ETS1P14921 441 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PGAM1P18669 254 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 MYL12AP19105 171 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CD72P21854 359 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 MATN1P21941 496 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 KELP23276 732 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TM4SF4P48230 202 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PRMT2P55345 433 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RAB5BP61020 215 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF425Q6IV72 752 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SZRD1Q7Z422 152 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 COMMD7Q86VX2 200 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF276Q8N554 614 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PCDH19Q8TAB3 1148 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TBC1D15Q8TC07 691 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TRIM43Q96BQ3 446 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GLT1D1Q96MS3 346 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CSPG4P5Q96PW8 444 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PFDN5Q99471 154 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PTPN18Q99952 460 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PSD2Q9BQI7 771 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PPA2Q9H2U2 334 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GJD2Q9UKL4 321 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SSR3Q9UNL2 185 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CLCA2Q9UQC9 943 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GINS2Q9Y248 185 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TBC1D30Q9Y2I9 924 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CASP8AP2Q9UKL3 1982 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PIGBOS1A0A0B4J2F0 54 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM189-UBE2V1I3L0A0 370 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TADA2AO75478 443 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PGLSO95336 258 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 APOC3P02656 99 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PROS1P07225 676 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SNRPB2P08579 225 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 EVI2BP34910 448 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 EIF2DP41214 584 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PRKD1Q15139 912 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 STEAP4Q687X5 459 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PIGZQ86VD9 579 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 DENND1AQ8TEH3 1009 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 BTN2A2Q8WVV5 523 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 C10orf82Q8WW14 230 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PMM1Q92871 262 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ELMO3Q96BJ8 720 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SENP8Q96LD8 212 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 HYLS1Q96M11 299 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PEBP4Q96S96 227 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 FTHL17Q9BXU8 183 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CHIAQ9BZP6 476 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 USP29Q9HBJ7 922 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CASS4Q9NQ75 786 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ERGIC3Q9Y282 383 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 AAR2Q9Y312 384 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PCDHA11Q9Y5I1 949 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 DHRS12A0PJE2 317 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 FAM220BPB1ANY3 271 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 AP1G1O43747 822 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TLL1O43897 1013 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 EOMESO95936 686 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ZSCAN5DPP0CG00 497 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NCAM1P13591 858 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CFL1P23528 166 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PRKAR1BP31321 381 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ELK3P41970 407 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ATXN1P54253 815 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NRG1Q02297 640 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 BTN1A1Q13410 526 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RNF151Q2KHN1 245 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GALNTL6Q49A17 601 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RAB41Q5JT25 222 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM236Q5W0B7 351 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GDPGP1Q6ZNW5 385 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 FAM35AQ86V20 835 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PHOX2BQ99453 314 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PELOQ9BRX2 385 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SLITRK2Q9H156 845 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 R3HDMLQ9H3Y0 253 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PCDHB16Q9NRJ7 776 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 LIMD1Q9UGP4 676 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ACSL5Q9ULC5 683 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CBY1Q9Y3M2 126 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 IRAK3Q9Y616 596 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TLL2Q9Y6L7 1015 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 EVPLQ92817 2033 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ANKDD1BA6NHY2 528 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 MCIDASD6RGH6 385 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 HOXA2O43364 376 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RFPL2O75678 378 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CNPP09543 421 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms