RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NAPGQ99747 312 aaPredicted RBP14.62□□□□□ -0.07
USB1-203ENST00000539737 TBL1YQ9BQ87 522 aa14.62□□□□□ -0.07
USB1-203ENST00000539737 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.62□□□□□ -0.07
USB1-203ENST00000539737 ZNF768Q9H5H4 540 aaKnown RBP14.62□□□□□ -0.07
USB1-203ENST00000539737 PAK5Q9P286 719 aa14.62□□□□□ -0.07
USB1-203ENST00000539737 MAP10Q9P2G4 905 aa14.62□□□□□ -0.07
USB1-203ENST00000539737 NFKBIL1Q9UBC1 381 aaPredicted RBP14.62□□□□□ -0.07
USB1-203ENST00000539737 TMPRSS11EQ9UL52 423 aa14.62□□□□□ -0.07
USB1-203ENST00000539737 DRG1Q9Y295 367 aaKnown RBP14.62□□□□□ -0.07
USB1-203ENST00000539737 IGHV5-51A0A0C4DH38 117 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 KIR2DS5A0A0G2JLQ3 304 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 A0A0G2JNG1 304 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 OR5K4A6NMS3 321 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 TCP11X1B4DZS4 312 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 GPR89AB7ZAQ6 455 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 KIR2DS3K7RE56 304 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 GPR39O43194 453 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 CLDN1O95832 211 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 GPR89BP0CG08 455 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 ADRA1AP35348 466 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 SEMA5AQ13591 1074 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 KIR2DS5Q14953 304 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 INSCQ1MX18 579 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 ZDHHC20Q5W0Z9 365 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 RANBP10Q6VN20 620 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 GSTA5Q7RTV2 222 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 TMC3Q7Z5M5 1100 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 ZNF547Q8IVP9 402 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 PRELID2Q8N945 189 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 BLOC1S5Q8TDH9 187 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 LHX9Q9NQ69 397 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 SPO11Q9Y5K1 396 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 ABCA12Q86UK0 2595 aa14.61□□□□□ -0.07
USB1-203ENST00000539737 CTAGE9A4FU28 777 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 METTL18O95568 372 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 AP2A1O95782 977 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 AGTP01019 485 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 FGF5P12034 268 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 HMGCLP35914 325 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 PTGIRP43119 386 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 CAPZBP47756 277 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 ARCN1P48444 511 aaKnown RBP14.6□□□□□ -0.07
USB1-203ENST00000539737 GTF2H3Q13889 308 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 CRTC2Q53ET0 693 aaPredicted RBP14.6□□□□□ -0.07
USB1-203ENST00000539737 KCTD11Q693B1 232 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 LINC00523Q86TU6 105 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 TRAM1L1Q8N609 369 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 Q8NA96 180 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 GALNT11Q8NCW6 608 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 COG1Q8WTW3 980 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 C19orf60Q96EN9 201 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 TCTN2Q96GX1 697 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 MS4A14Q96JA4 679 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 TTC25Q96NG3 672 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 NRTNQ99748 197 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 MAP4K5Q9Y4K4 846 aa14.6□□□□□ -0.07
USB1-203ENST00000539737 A6NL46 340 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 E7EVH7 732 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 AURKAO14965 403 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 SORBS2O94875 1100 aaKnown RBP14.59□□□□□ -0.07
USB1-203ENST00000539737 VCLP18206 1134 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 XRCC1P18887 633 aaPredicted RBP14.59□□□□□ -0.07
USB1-203ENST00000539737 LMAN1P49257 510 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 PDE1BQ01064 536 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 TUBB3Q13509 450 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 LAMB3Q13751 1172 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 PAPD7Q5XG87 772 aaKnown RBP14.59□□□□□ -0.07
USB1-203ENST00000539737 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
USB1-203ENST00000539737 PPP1R3BQ86XI6 285 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 SLC38A9Q8NBW4 561 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 GDAP1Q8TB36 358 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 PRR7Q8TB68 274 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 GLYATL1Q969I3 302 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 APOL2Q9BQE5 337 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 SLC25A23Q9BV35 468 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 EPB41L1Q9H4G0 881 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 ARNT2Q9HBZ2 717 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 TRIM39Q9HCM9 518 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 BPIFA1Q9NP55 256 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.59□□□□□ -0.07
USB1-203ENST00000539737 PADI1Q9ULC6 663 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 PSMD13Q9UNM6 376 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 PKP3Q9Y446 797 aa14.59□□□□□ -0.07
USB1-203ENST00000539737 CFAP20Q9Y6A4 193 aaKnown RBP14.59□□□□□ -0.07
USB1-203ENST00000539737 C2orf81A6NN90 581 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 MASP2O00187 686 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 KMOO15229 486 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 VEGFDO43915 354 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 CRTAMO95727 393 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 CCNYL3P0C7X3 344 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 ZNF7P17097 686 aaPredicted RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 DCTP40126 519 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 FNTAP49354 379 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 PGDP52209 483 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 GPS2Q13227 327 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 SPARCL1Q14515 664 aa14.58□□□□□ -0.08
USB1-203ENST00000539737 TAF1AQ15573 450 aaPredicted RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 INPP5JQ15735 1006 aaPredicted RBP14.58□□□□□ -0.08
USB1-203ENST00000539737 GPR19Q15760 415 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms