RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DNAJB1P25685 340 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 EVX2Q03828 476 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 OLFML2AQ68BL7 652 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 KIAA0930Q6ICG6 404 aaPredicted RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 CCDC80Q76M96 950 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 OR7D4Q8NG98 312 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 ACDQ96AP0 544 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 RNF31Q96EP0 1072 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 CENPNQ96H22 339 aaPredicted RBP6.4□□□□□ -1.39
LSAMP-207ENST00000539563 NMUR2Q9GZQ4 415 aa6.4□□□□□ -1.39
LSAMP-207ENST00000539563 LAMB4A4D0S4 1761 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MYBPHLA2RUH7 354 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 UNCXA6NJT0 531 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PRODHO43272 600 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ANGPTL1O95841 491 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 AGR2O95994 175 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CD48P09326 243 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PAX7P23759 505 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MPIP34949 423 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CCR8P51685 355 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 BNIP1Q12981 228 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CHIT1Q13231 466 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 IL18Q14116 193 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ZBTB6Q15916 424 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TBC1D25Q3MII6 688 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 VITQ6UXI7 678 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 FRRS1Q6ZNA5 592 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 AMZ2Q86W34 360 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MCEMP1Q8IX19 187 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 NETO2Q8NC67 525 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 EXOSC8Q96B26 276 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 C5orf34Q96MH7 638 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TRIM2Q9C040 744 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 C1orf109Q9NX04 203 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 NOCTQ9UK39 431 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 Q9Y3F1 56 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PCDHGB7Q9Y5F8 929 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CAPN14A8MX76 684 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 FADS2O95864 444 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 GNSP15586 552 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ILF3Q12906 894 aaKnown RBP eCLIP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 DPY19L1Q2PZI1 675 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 GPR33Q49SQ1 333 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CLEC6AQ6EIG7 209 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ECHDC2Q86YB7 292 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 LCN9Q8WX39 176 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 FCGR1BQ92637 280 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 SLC35G5Q96KT7 338 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TTYH3Q9C0H2 523 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ABCG8Q9H221 673 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 IKZF2Q9UKS7 526 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CPQQ9Y646 472 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TEX46H3BTG2 121 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ASPAP45381 313 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 IFI44LQ53G44 452 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 KLHL22Q53GT1 634 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ABHD13Q7L211 337 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 OTOP2Q7RTS6 562 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 SLCO6A1Q86UG4 719 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ARL14EPQ8N8R7 260 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CAPSLQ8WWF8 208 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MFSD3Q96ES6 412 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 UPB1Q9UBR1 384 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 IQCMA0A1B0GVH7 501 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CCNB2O95067 398 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PAPSS2O95340 614 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 KCTD21Q4G0X4 260 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 HPS6Q86YV9 775 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF527Q8NB42 609 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 GIPC3Q8TF64 312 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 RBM18Q96H35 190 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MRPS30Q9NP92 439 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PCDHGC4Q9Y5F7 938 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 FAM234BA2RU67 622 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TNFP01375 233 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 C8AP07357 584 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 DGKGP49619 791 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 RALGPS1Q5JS13 557 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 LPCAT4Q643R3 524 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 LDB1Q86U70 411 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TMEM139Q8IV31 216 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF781Q8N8C0 355 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TRPV1Q8NER1 839 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 SNX33Q8WV41 574 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ZDHHC3Q9NYG2 299 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CD84Q9UIB8 345 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MICAL3Q7RTP6 2002 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 A0A0X1KG70 313 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PLIN3O60664 434 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 GATBO75879 557 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 NADKO95544 446 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 MT-CYBP00156 380 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 RPS9P46781 194 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PITPNAQ00169 270 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 RBBP4Q09028 425 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CCDC36Q8IYA8 594 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 KREMEN2Q8NCW0 462 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms