RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 RHBDD1Q8TEB9 315 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 SLC37A2Q8TED4 501 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 INSM2Q96T92 566 aaPredicted RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 WWP1Q9H0M0 922 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 CENPHQ9H3R5 247 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 DPEP2Q9H4A9 486 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 OSGEPL1Q9H4B0 414 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 PPANQ9NQ55 473 aaKnown RBP12.72□□□□□ -0.37
CCDC42-202ENST00000539522 WASH6PQ9NQA3 447 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 ZFATQ9P243 1243 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 PSMD13Q9UNM6 376 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
CCDC42-202ENST00000539522 RP1P56715 2156 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 NEMP2A6NFY4 417 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 POC1B-GALNT4F8VUJ3 575 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CDH16O75309 829 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 TRIM16O95361 564 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 OR56A5P0C7T3 313 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CKMT1AP12532 417 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 FDXRP22570 491 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ATP5DP30049 168 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ACADVLP49748 655 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ACSBG2Q5FVE4 666 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 LGSNQ5TDP6 509 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ZNF438Q7Z4V0 828 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 GLRX5Q86SX6 157 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 SLCO6A1Q86UG4 719 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CEP97Q8IW35 865 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ARL10Q8N8L6 244 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 SIDT2Q8NBJ9 832 aaKnown RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ELMO1Q92556 727 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CDKL2Q92772 493 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ARL8AQ96BM9 186 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ATXN7L3BQ96GX2 97 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CNDP2Q96KP4 475 aaKnown RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 RBBP8Q99708 897 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 DHRS4Q9BTZ2 278 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 LGALS13Q9UHV8 139 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 GNPTGQ9UJJ9 305 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 IKZF3Q9UKT9 509 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 MTO1Q9Y2Z2 717 aaKnown RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 PCDHB1Q9Y5F3 818 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 CFAP20Q9Y6A4 193 aaKnown RBP12.71□□□□□ -0.37
CCDC42-202ENST00000539522 IKBKGQ9Y6K9 419 aa12.71□□□□□ -0.37
CCDC42-202ENST00000539522 SPTBN4Q9H254 2564 aa12.71□□□□□ -0.38
CCDC42-202ENST00000539522 SPAARA0A1B0GVQ0 90 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 KRT87PA6NCN2 255 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 KCNJ13O60928 360 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 SLCO2B1O94956 709 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 TSPAN12O95859 305 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 FTH1P02794 183 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 SLCO1A2P46721 670 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 CD151P48509 253 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 CSE1LP55060 971 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 NAB1Q13506 487 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 BOP1Q14137 746 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 ZNF460Q14592 562 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 SUZ12Q15022 739 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 RPE65Q16518 533 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 C14orf28Q4W4Y0 310 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 HECTD2Q5U5R9 776 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 PTRHD1Q6GMV3 140 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 ADGRD1Q6QNK2 874 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 CYHR1Q6ZMK1 362 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 ZNF761Q86XN6 746 aaPredicted RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 SLC22A15Q8IZD6 547 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 PPM1NQ8N819 430 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 EPS8L3Q8TE67 593 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 DCAKDQ8WVC6 231 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 KCNJ9Q92806 393 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 ZBTB9Q96C00 473 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 GPR21Q99679 349 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 DUSP23Q9BVJ7 150 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 RHOJQ9H4E5 214 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 RUVBL2Q9Y230 463 aaKnown RBP12.7□□□□□ -0.38
CCDC42-202ENST00000539522 PTPRBP23467 1997 aa12.7□□□□□ -0.38
CCDC42-202ENST00000539522 DCDC2BA2VCK2 349 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 SMIM23A6NLE4 172 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 H3BQF6 201 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 LIN7AO14910 233 aaPredicted RBP12.69□□□□□ -0.38
CCDC42-202ENST00000539522 LDOC1O95751 146 aaPredicted RBP12.69□□□□□ -0.38
CCDC42-202ENST00000539522 GSTM1P09488 218 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 XRCC1P18887 633 aaPredicted RBP12.69□□□□□ -0.38
CCDC42-202ENST00000539522 CD9P21926 228 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 IDSP22304 550 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 ACP1P24666 158 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 PPARGP37231 505 aaPredicted RBP12.69□□□□□ -0.38
CCDC42-202ENST00000539522 FASLGP48023 281 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 CLDN6P56747 220 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 TAS2R39P59534 338 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 GSTM4Q03013 218 aa12.69□□□□□ -0.38
CCDC42-202ENST00000539522 CFHR1Q03591 330 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms