RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ELAVL2Q12926 359 aaKnown RBP4.25□□□□□ -1.73
CCDC7-209ENST00000539197 SLC25A30Q5SVS4 291 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 HACE1Q8IYU2 909 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 Q8N377 158 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 TRPC4APQ8TEL6 797 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 HSD17B8Q92506 261 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 DAZLQ92904 295 aaKnown RBP4.25□□□□□ -1.73
CCDC7-209ENST00000539197 NSMCE3Q96MG7 304 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 SCLT1Q96NL6 688 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 MYADMQ96S97 322 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 FUCA2Q9BTY2 467 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 EPHA6Q9UF33 1036 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 MAN1B1Q9UKM7 699 aa4.25□□□□□ -1.73
CCDC7-209ENST00000539197 TMEM8BA6NDV4 472 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 KLF11O14901 512 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 SPARCP09486 303 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 XBP1P17861 261 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 PIK3CAP42336 1068 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 CCT5P48643 541 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 PGFP49763 221 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 TAF13Q15543 124 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 WLSQ5T9L3 541 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 FAM109BQ6ICB4 259 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-209ENST00000539197 ACAD10Q6JQN1 1059 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 PIGZQ86VD9 579 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 OR1J1Q8NGS3 322 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 NUDCD1Q96RS6 583 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 RAB11FIP5Q9BXF6 653 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 PITPNM3Q9BZ71 974 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 TRIM6Q9C030 488 aaPredicted RBP4.24□□□□□ -1.73
CCDC7-209ENST00000539197 CROCCQ5TZA2 2017 aa4.24□□□□□ -1.73
CCDC7-209ENST00000539197 FAM237BA0A1B0GVD1 139 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 IFRD1O00458 451 aaPredicted RBP4.23□□□□□ -1.73
CCDC7-209ENST00000539197 PIGNO95427 931 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 GPIP06744 558 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 GPR143P51810 404 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 PPP2R2BQ00005 443 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 GOLGA8DPQ0D2H9 430 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 HLA-BQ31612 363 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 Q6ZRP5 223 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 CLEC17AQ6ZS10 378 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 C11orf53Q8IXP5 236 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 RASL10AQ92737 203 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 CENPTQ96BT3 561 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 KRT12Q99456 494 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 ACKR4Q9NPB9 350 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 A4GALTQ9NPC4 353 aa4.23□□□□□ -1.73
CCDC7-209ENST00000539197 IGLV3-10A0A075B6K4 115 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 MED19A0JLT2 244 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-209ENST00000539197 HUNKP57058 714 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 GSDMDP57764 484 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 E2F5Q15329 346 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 Q6ZR54 194 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 R3HCC1LQ7Z5L2 792 aaKnown RBP4.22□□□□□ -1.73
CCDC7-209ENST00000539197 DYRK2Q92630 601 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 GTF3AQ92664 365 aaKnown RBP4.22□□□□□ -1.73
CCDC7-209ENST00000539197 SGK494Q96LW2 274 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 USP28Q96RU2 1077 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 GAD1Q99259 594 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 SOSTQ9BQB4 213 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 NUDT4Q9NZJ9 180 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 SLC13A4Q9UKG4 626 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 RARRES3Q9UL19 164 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 WDR37Q9Y2I8 494 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 ANGPTL3Q9Y5C1 460 aa4.22□□□□□ -1.73
CCDC7-209ENST00000539197 ASTN2O75129 1339 aaPredicted RBP4.21□□□□□ -1.73
CCDC7-209ENST00000539197 SOS1Q07889 1333 aaPredicted RBP4.21□□□□□ -1.73
CCDC7-209ENST00000539197 A0A1W2PRB8 838 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 MSGN1A6NI15 193 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 ZNF195O14628 629 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 ACADMP11310 421 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 PRG2P13727 222 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 EFNA1P20827 205 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-209ENST00000539197 CDC25CP30307 473 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 B3GALT5-AS1P59052 145 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 ADALQ6DHV7 355 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 FIP1L1Q6UN15 594 aaKnown RBP4.21□□□□□ -1.74
CCDC7-209ENST00000539197 PTAR1Q7Z6K3 402 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-209ENST00000539197 GALNT5Q7Z7M9 940 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 ADIPOR2Q86V24 386 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 LACC1Q8IV20 430 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 SLC39A11Q8N1S5 342 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 OR5AP2Q8NGF4 316 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 HGH1Q9BTY7 390 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 ATP13A3Q9H7F0 1226 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 WASH6PQ9NQA3 447 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 SETD4Q9NVD3 440 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 LUZP4Q9P127 313 aa4.21□□□□□ -1.74
CCDC7-209ENST00000539197 SPIN1Q9Y657 262 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-209ENST00000539197 EPM2AB3EWF7 344 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 OGG1O15527 345 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 BIRC3Q13489 604 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 ZNF584Q8IVC4 421 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 MARVELD2Q8N4S9 558 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 PRSS33Q8NF86 280 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 ELMOD3Q96FG2 381 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 SLC22A12Q96S37 553 aa4.2□□□□□ -1.74
CCDC7-209ENST00000539197 DGCR6LQ9BY27 220 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms