RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 RALBP11234 206 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 NDUFS1P28331 727 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 PTPN7P35236 360 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 ARCN1P48444 511 aaKnown RBP12.18□□□□□ -0.46
VAMP1-206ENST00000538970 CD97P48960 835 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 PDE1BQ01064 536 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 GPS2Q13227 327 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 IL10RAQ13651 578 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 TMTC4Q5T4D3 741 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 CAPRIN2Q6IMN6 1127 aaKnown RBP12.18□□□□□ -0.46
VAMP1-206ENST00000538970 DENND5AQ6IQ26 1287 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 ARMC6Q6NXE6 501 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 FBXO38Q6PIJ6 1188 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 SARM1Q6SZW1 724 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 ZNF517Q6ZMY9 492 aaPredicted RBP12.18□□□□□ -0.46
VAMP1-206ENST00000538970 SYVN1Q86TM6 617 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 TMEM126BQ8IUX1 230 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 CCDC170Q8IYT3 715 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 NXPE1Q8N323 547 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 FAM26EQ8N5C1 309 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 TEX19Q8NA77 164 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 SLC38A9Q8NBW4 561 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 OR8K5Q8NH50 307 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 HM13Q8TCT9 377 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 THAP4Q8WY91 577 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 ULK4Q96C45 1275 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 DCUN1D1Q96GG9 259 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 SPATA13Q96N96 652 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 COPS8Q99627 209 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 C19orf43Q9BQ61 176 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 FERMT1Q9BQL6 677 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 LATS2Q9NRM7 1088 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 KCND1Q9NSA2 647 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 POMT2Q9UKY4 750 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 PCDHA3Q9Y5H8 950 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
VAMP1-206ENST00000538970 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 KCNN4O15554 427 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 STK10O94804 968 aaKnown RBP12.17□□□□□ -0.46
VAMP1-206ENST00000538970 POLBP06746 335 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 RBP3P10745 1247 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 POLR2CP19387 275 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-206ENST00000538970 ITGALP20701 1170 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 EIF3EP60228 445 aaKnown RBP12.17□□□□□ -0.46
VAMP1-206ENST00000538970 RPS15P62841 145 aaKnown RBP12.17□□□□□ -0.46
VAMP1-206ENST00000538970 TMPRSS15P98073 1019 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 ABRQ12979 859 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 PRKAA1Q13131 559 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 PRPSAP1Q14558 356 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 GSE1Q14687 1217 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 SPA17Q15506 151 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 ZNF658BQ4V348 819 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-206ENST00000538970 IZUMO3Q5VZ72 239 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 CPZQ66K79 652 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 SNX20Q7Z614 316 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 KLHDC8BQ8IXV7 354 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 CFAP206Q8IYR0 622 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 ACVR1CQ8NER5 493 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 OR4E2Q8NGC2 313 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 MR1Q95460 341 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 LRFN5Q96NI6 719 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 PPP1R2P1Q96PQ5 205 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 FAM118BQ9BPY3 351 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 TBL1YQ9BQ87 522 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 OSBPL8Q9BZF1 889 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 FAM96AQ9H5X1 160 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 LUC7LQ9NQ29 371 aaKnown RBP12.17□□□□□ -0.46
VAMP1-206ENST00000538970 HEBP2Q9Y5Z4 205 aa12.17□□□□□ -0.46
VAMP1-206ENST00000538970 IGLV3-16A0A075B6K0 115 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 C17orf113A0A1B0GUU1 675 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 RCCD1A6NED2 376 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 SLC9B1P1A6NJY1 282 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 MATN2O00339 956 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CCL22O00626 93 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 LDB2O43679 373 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CDH3P22223 829 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CTNNA2P26232 953 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 MC4RP32245 332 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-206ENST00000538970 HADHAP40939 763 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 MLLT10P55197 1068 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CHAF1BQ13112 559 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 KRT33BQ14525 404 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 DARS2Q6PI48 645 aaKnown RBP12.16□□□□□ -0.46
VAMP1-206ENST00000538970 MICALCLQ6ZW33 695 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 HEXDCQ8WVB3 486 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CPT1BQ92523 772 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 ALG3Q92685 438 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CALR3Q96L12 384 aaKnown RBP12.16□□□□□ -0.46
VAMP1-206ENST00000538970 PITPNM3Q9BZ71 974 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 CHST8Q9H2A9 424 aa12.16□□□□□ -0.46
VAMP1-206ENST00000538970 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms