RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 CES5AQ6NT32 575 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 BHLHA9Q7RTU4 235 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 ZNF540Q8NDQ6 660 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 FAM162AQ96A26 154 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 ITCHQ96J02 903 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 AGAP4Q96P64 663 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 ZNF221Q9UK13 617 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 TBKBP1A7MCY6 615 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 SCELO95171 688 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 IGFBP5P24593 272 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 HOXC13P31276 330 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 CLK1P49759 484 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 SOX4Q06945 474 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 KEAP1Q14145 624 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 NOTUMQ6P988 496 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 RAVER1Q8IY67 606 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 METTL4Q8N3J2 472 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 FAM83FQ8NEG4 500 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 ZMIZ2Q8NF64 920 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 IMP4Q96G21 291 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 RNF38Q9H0F5 515 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 MAGIXQ9H6Y5 334 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 OSER1Q9NX31 292 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 VAPAQ9P0L0 249 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 ERVW-1Q9UQF0 538 aa18.3■□□□□ 0.52
SFSWAP-207ENST00000538548 STX16O14662 325 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 HAT1O14929 419 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 ECI2O75521 394 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 GLP2RO95838 553 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 PFKLP17858 780 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 E2F2Q14209 437 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 LRRC8DQ7L1W4 858 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 OR10A6Q8NH74 314 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 DERL2Q9GZP9 239 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 C6orf62Q9GZU0 229 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 CRTAC1Q9NQ79 661 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 NUDT5Q9UKK9 219 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 PCTPQ9UKL6 214 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 PCDHGA3Q9Y5H0 932 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 N6AMT1Q9Y5N5 214 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 OR2A25A4D2G3 310 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 CXCR6O00574 342 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 HOXD8P13378 290 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 DGKQP52824 942 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 WSCD1Q658N2 575 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 PPP2R2DQ66LE6 453 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 LAIR1Q6GTX8 287 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 TMC5Q6UXY8 1006 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 PRR23CQ6ZRP0 262 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 Q6ZSR9 355 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 SLC22A15Q8IZD6 547 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 ASCC1Q8N9N2 400 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 IL17RDQ8NFM7 739 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 CDK5RAP1Q96SZ6 601 aaKnown RBP18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 ACTL8Q9H568 366 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 ZNF408Q9H9D4 720 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 ZBTB20Q9HC78 741 aaPredicted RBP18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 SYTL2Q9HCH5 934 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 NDFIP2Q9NV92 336 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 GINS2Q9Y248 185 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 U3KQV3 271 aa18.29■□□□□ 0.52
SFSWAP-207ENST00000538548 NYNRINQ9P2P1 1898 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 ELOVL7A1L3X0 281 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 DFNA5O60443 496 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 MITFO75030 526 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 HOXB6P17509 224 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CCR1P32246 355 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 HTR7P34969 479 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 PRKCDQ05655 676 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 RBBP7Q16576 425 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 PLA2G4EQ3MJ16 856 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 FAM209AQ5JX71 171 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 UBE2UQ5VVX9 321 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 MRNIPQ6NTE8 343 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 DPP9Q86TI2 863 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 MICU2Q8IYU8 434 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 TBATAQ96M53 351 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 THUMPD3Q9BV44 507 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CCDC177Q9NQR7 707 aaPredicted RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 TMEM30AQ9NV96 361 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CD3EAPO15446 510 aaKnown RBP18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 RETP07949 1114 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CHRNB1P11230 501 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 G6PDP11413 515 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CD86P42081 329 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 KRT6CP48668 564 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 SCNN1GP51170 649 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 GPR162Q16538 588 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 TPRG1LQ5T0D9 272 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 CYP20A1Q6UW02 462 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 GPRIN3Q6ZVF9 776 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 GDPD3Q7L5L3 318 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 OR56A4Q8NGH8 313 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 GPR150Q8NGU9 434 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 OR6F1Q8NGZ6 308 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 SLC38A4Q969I6 547 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 RHNO1Q9BSD3 238 aa18.28■□□□□ 0.52
SFSWAP-207ENST00000538548 AARSD1Q9BTE6 412 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms