RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PLA2G15Q8NCC3 412 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 WFIKKN2Q8TEU8 576 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 OR8D1Q8WZ84 308 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 VPS33AQ96AX1 596 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 WDR41Q9HAD4 459 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 PRSS16Q9NQE7 514 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
ACTN1-205ENST00000538545 S100BP04271 92 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 ADRB3P13945 408 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 XRCC1P18887 633 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 TIE1P35590 1138 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 CEACAM7Q14002 265 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 ZNF284Q2VY69 593 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 IER5LQ5T953 404 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 RAET1GQ6H3X3 334 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 ERAP2Q6P179 960 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 TXNDC11Q6PKC3 985 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 PDPRQ8NCN5 879 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 PPFIBP2Q8ND30 876 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 SUSD6Q92537 303 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 MMADHCQ9H3L0 296 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 THG1LQ9NWX6 298 aaKnown RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 LOC730098B7Z3J9 87 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 WNT9AO14904 365 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 CIB2O75838 187 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 BAG2O95816 211 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 PSMC3P17980 439 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 GPX3P22352 226 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 GGT5P36269 586 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 PTDSS1P48651 473 aaKnown RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 MS4A2Q01362 244 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 FCHO2Q0JRZ9 810 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 TMEM115Q12893 351 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 C2orf27AQ580R0 203 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 REP15Q6BDI9 236 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 PGM2L1Q6PCE3 622 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 TMEM220Q6QAJ8 160 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 ARHGAP24Q8N264 748 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 BTN2A2Q8WVV5 523 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-205ENST00000538545 GLYATL1Q969I3 302 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 GDF15Q99988 308 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 C1QTNF3Q9BXJ4 246 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 OR2AG1Q9H205 316 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 ANGPTL3Q9Y5C1 460 aa13.84□□□□□ -0.19
ACTN1-205ENST00000538545 CXorf51AA0A1B0GTR3 108 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 TSPAN11A1L157 253 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 PRNPP04156 253 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 POU2F2P09086 479 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 LAMP2P13473 410 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 EZRP15311 586 aaKnown RBP13.83□□□□□ -0.19
ACTN1-205ENST00000538545 EPORP19235 508 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 CAPN3P20807 821 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 NEK2P51955 445 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 CCNG1P51959 295 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 UFM1P61960 85 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 CCNIQ14094 377 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 PTK2BQ14289 1009 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 SQLEQ14534 574 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 ELAVL3Q14576 367 aaKnown RBP13.83□□□□□ -0.19
ACTN1-205ENST00000538545 PDGFRLQ15198 375 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 CPSF6Q16630 551 aaKnown RBP eCLIP13.83□□□□□ -0.19
ACTN1-205ENST00000538545 CRTC3Q6UUV7 619 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 RNF111Q6ZNA4 994 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 MILR1Q7Z6M3 343 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 RAVER1Q8IY67 606 aaKnown RBP13.83□□□□□ -0.19
ACTN1-205ENST00000538545 SFRP1Q8N474 314 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 STMN2Q93045 179 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 TIFAQ96CG3 184 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 OPTCQ9UBM4 332 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 KLQ9UEF7 1012 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 CNOT6Q9ULM6 557 aaKnown RBP13.83□□□□□ -0.19
ACTN1-205ENST00000538545 TMEM98Q9Y2Y6 226 aa13.83□□□□□ -0.19
ACTN1-205ENST00000538545 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-205ENST00000538545 EDDM13A0A1B0GTR0 161 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 A0A1W2PQ67 120 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 E7ENX8 843 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 SCAMP1O15126 338 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 MID1O15344 667 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-205ENST00000538545 MLYCDO95822 493 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 UROSP10746 265 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 P2RY2P41231 377 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 ACTR3P61158 418 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 CAPRIN1Q14444 709 aaKnown RBP13.83□□□□□ -0.2
ACTN1-205ENST00000538545 PCBP2Q15366 365 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■□□ 17.9
ACTN1-205ENST00000538545 LRRC36Q1X8D7 754 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 TTLL9Q3SXZ7 439 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 DOK6Q6PKX4 331 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 FBXW8Q8N3Y1 598 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 TRAM1L1Q8N609 369 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-205ENST00000538545 CD244Q9BZW8 370 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 PCDHAC1Q9H158 963 aa13.83□□□□□ -0.2
ACTN1-205ENST00000538545 ADA2Q9NZK5 511 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms