RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TTC34A8MYJ7 566 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SNUPNO95149 360 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 TGFB1P01137 390 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 NCBP2P52298 156 aaKnown RBP eCLIP5.28□□□□□ -1.56
LRP6-203ENST00000538239 RPP38P78345 283 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 TNK2Q07912 1038 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 P4HA3Q7Z4N8 544 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 CCDC103Q8IW40 242 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 IZUMO1Q8IYV9 350 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 DHRSXQ8N5I4 330 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 OR10T2Q8NGX3 314 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SORCS1Q8WY21 1168 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 HIC2Q96JB3 615 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MS4A4AQ96JQ5 239 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TTYH3Q9C0H2 523 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 MCCC2Q9HCC0 563 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PLLPQ9Y342 182 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 COQ4Q9Y3A0 265 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 AP4S1Q9Y587 144 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 ALS2Q96Q42 1657 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PI15O43692 258 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TPST2O60704 377 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 SASH3O75995 380 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 BEST1O76090 585 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 KLK3P07288 261 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 FAM58BPP0C7Q3 252 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 UROSP10746 265 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 KIR3DL1P43629 444 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PTP4A2Q12974 167 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PUS10Q3MIT2 529 aaKnown RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 TOR1AIP1Q5JTV8 583 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TXNRD3NBQ6F5E7 133 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PHC3Q8NDX5 983 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 NEK7Q8TDX7 302 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 NKD2Q969F2 451 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 SLC22A18Q96BI1 424 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 TAPBPLQ9BX59 468 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 STRADBQ9C0K7 418 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 C6orf62Q9GZU0 229 aaPredicted RBP5.28□□□□□ -1.56
LRP6-203ENST00000538239 TBC1D23Q9NUY8 699 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 GMPPBQ9Y5P6 360 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 PIAS3Q9Y6X2 628 aa5.28□□□□□ -1.56
LRP6-203ENST00000538239 A8MUI8 341 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 XKRYO14609 159 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RNGTTO60942 597 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 ATP6V1G2O95670 118 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 COL6A2P12110 1019 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLBPQ14493 270 aaKnown RBP eCLIP5.27□□□□□ -1.57
LRP6-203ENST00000538239 TRIM71Q2Q1W2 868 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 HKDC1Q2TB90 917 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZNF542PQ5EBM4 170 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 CLLU1OSQ5K130 101 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PRAMEF14Q5SWL7 426 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PRAMEF13Q5VWM6 474 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 FAM91A1Q658Y4 838 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZFP1Q6P2D0 407 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZNF852Q6ZMS4 543 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 KIAA2013Q8IYS2 634 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 AADATQ8N5Z0 425 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 COX18Q8N8Q8 333 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 NIPA2Q8N8Q9 360 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 BPIFB6Q8NFQ5 453 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RP9Q8TA86 221 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 TMEM40Q8WWA1 233 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZNF514Q96K75 400 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 PPM1MQ96MI6 270 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 MIPEPQ99797 713 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 YIPF4Q9BSR8 244 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 TMEM248Q9NWD8 314 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GALNT8Q9NY28 637 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PHF24Q9UPV7 400 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 EFCAB10A6NFE3 127 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GRXCR1A8MXD5 290 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PEX12O00623 359 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 TRIM38O00635 465 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 KMOO15229 486 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 RGS20O76081 388 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PLGP00747 810 aaPredicted RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 PPIBP23284 216 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 WDR5P61964 334 aaKnown RBP5.27□□□□□ -1.57
LRP6-203ENST00000538239 C1orf61Q13536 156 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SGCBQ16585 318 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PLEKHG6Q3KR16 790 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GPRIN1Q7Z2K8 1008 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 ZSCAN1Q8NBB4 408 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 FAM110BQ8TC76 370 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GPR151Q8TDV0 419 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 FAM3CQ92520 227 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 NECTIN4Q96NY8 510 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 DGCR6LQ9BY27 220 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLCO1B3Q9NPD5 702 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 FTSJ1Q9UET6 329 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLC2A6Q9UGQ3 507 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PPM1HQ9ULR3 514 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 GPR34Q9UPC5 381 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 IQCMA0A1B0GVH7 501 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 SLC7A4O43246 635 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 LCA5LO95447 670 aa5.27□□□□□ -1.57
LRP6-203ENST00000538239 PAK4O96013 591 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms