RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TUBGCP3Q96CW5 907 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 DNAJA3Q96EY1 480 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 TSPAN17Q96FV3 270 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ZNF419Q96HQ0 510 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 ELF4Q99607 663 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 SGK2Q9HBY8 427 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 MID1IP1Q9NPA3 183 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 EVA1BQ9NVM1 165 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 PSMC3IPQ9P2W1 217 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 PCDHB11Q9Y5F2 797 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 SNX8Q9Y5X2 465 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 OAS3Q9Y6K5 1087 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 PRSS21Q9Y6M0 314 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 LRRK2Q5S007 2527 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 PRSS38A1L453 326 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ANKRD65E5RJM6 399 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CHEK2O96017 543 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 IGLV3-27P01718 113 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 C1SP09871 688 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ITIH1P19827 911 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ATP5DP30049 168 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 GPC1P35052 558 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 IGFALSP35858 605 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CCNG1P51959 295 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 VSX2P58304 361 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 OC90Q02509 493 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 CAV1Q03135 178 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 LRRC8BQ6P9F7 803 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 TMC3Q7Z5M5 1100 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CEP295NLQ96MC4 621 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 SYTL2Q9HCH5 934 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 NCKIPSDQ9NZQ3 722 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 TAAR2Q9P1P5 351 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 FBXW2Q9UKT8 454 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 SLC12A4Q9UP95 1085 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 A0A1W2PPC4 97 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 PIPSLA2A3N6 862 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 OR2W5A6NFC9 320 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 METTL12A8MUP2 240 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ANHXE9PGG2 379 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 B3GALT4O96024 378 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 GSRP00390 522 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TGFB1P01137 390 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 IGLV3-25P01717 112 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 HMGCLP35914 325 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 RNF144AP50876 292 aaPredicted RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 GUCY1A3Q02108 690 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 FAM69BQ5VUD6 431 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TTLL10Q6ZVT0 673 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 CAND1Q86VP6 1230 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 ZBTB2Q8N680 514 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 FBXO15Q8NCQ5 510 aaPredicted RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 GPR150Q8NGU9 434 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 FBXO30Q8TB52 745 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 BTN2A2Q8WVV5 523 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 RERGQ96A58 199 aaPredicted RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 MRGPRX3Q96LB0 322 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 OPTCQ9UBM4 332 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 SLC23A2Q9UGH3 650 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 V9GYQ6 96 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 AP3B1O00203 1094 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 SIGLEC6O43699 453 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 SOCS5O75159 536 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 CDH16O75309 829 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ANP32DO95626 131 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 LATS1O95835 1130 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ANXA5P08758 320 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 PGDP52209 483 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 MAP7Q14244 749 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 PRKD1Q15139 912 aaPredicted RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 NR6A1Q15406 480 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 SPDYE7PQ495Y7 208 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ACBD5Q5T8D3 534 aaPredicted RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 NLRP9Q7RTR0 991 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 DSELQ8IZU8 1212 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 CAMKK1Q8N5S9 505 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 RASGEF1AQ8N9B8 481 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 FUBP1Q96AE4 644 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 DTD2Q96FN9 168 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 CABS1Q96KC9 395 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 NAT9Q9BTE0 207 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 RSPH9Q9H1X1 276 aaPredicted RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 TRIM39Q9HCM9 518 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ITM2CQ9NQX7 267 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 IL17CQ9P0M4 197 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TBC1D29Q9UFV1 150 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 VPS9D1Q9Y2B5 631 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 BTBD3Q9Y2F9 522 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 TMEM120BA0PK00 339 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 FADS2P1A8MWK0 482 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 RTCAO00442 366 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 PEX11AO75192 247 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 IL1RNP18510 177 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 CES1P23141 567 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 RBMS1P29558 406 aaKnown RBP7.09□□□□□ -1.27
MSH6-209ENST00000538136 RABIFP47224 123 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
MSH6-209ENST00000538136 ERV3-1Q14264 604 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms