RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ME2P23368 584 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PTK2BQ14289 1009 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ANKS6Q68DC2 871 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 GRAMD4Q6IC98 578 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 UGT3A1Q6NUS8 523 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 GPSM1Q86YR5 675 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 RBFAQ8N0V3 343 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PGAM4Q8N0Y7 254 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 CLDN19Q8N6F1 224 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 NAT16Q8N8M0 369 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 SNX31Q8N9S9 440 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ADCY4Q8NFM4 1077 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 OR2A12Q8NGT7 310 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ITFG1Q8TB96 612 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 FRS2Q8WU20 508 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 C19orf60Q96EN9 201 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 CIPCQ9C0C6 399 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ZDHHC6Q9H6R6 413 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 FBRSL1Q9HCM7 1045 aaKnown RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 TBC1D14Q9P2M4 693 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PCTPQ9UKL6 214 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 DMTF1Q9Y222 760 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 RNF11Q9Y3C5 154 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 CEPT1Q9Y6K0 416 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 MYOFQ9NZM1 2061 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 SCN8AQ9UQD0 1980 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 A0A0J9YVX5 310 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ATP6AP2A0A1C7CYW4 349 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 WASH3PC4AMC7 463 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 UBDO15205 165 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ATP6AP2O75787 350 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 BCAS2O75934 225 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 UGT2B4P06133 528 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 C1SP09871 688 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF26P17031 533 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 CDH2P19022 906 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 RPL10P27635 214 aaKnown RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PRDX3P30048 256 aaKnown RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 DNAJA1P31689 397 aaKnown RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 LCP2Q13094 533 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 DMC1Q14565 340 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 GEN1Q17RS7 908 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PTRHD1Q6GMV3 140 aaKnown RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 FAM109BQ6ICB4 259 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 GK5Q6ZS86 529 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PHYKPLQ8IUZ5 450 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 SORCS1Q8WY21 1168 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ESAMQ96AP7 390 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 RSPRY1Q96DX4 576 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ZNF641Q96N77 438 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 SLC2A11Q9BYW1 496 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 CLPBQ9H078 707 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 BRD9Q9H8M2 597 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 AKTIPQ9H8T0 292 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 CAPN10Q9HC96 672 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 SEMA4BQ9NPR2 832 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 DNAAF2Q9NVR5 837 aaKnown RBP10.57□□□□□ -0.72
CLIP1-210ENST00000538120 ERVW-1Q9UQF0 538 aa10.57□□□□□ -0.72
CLIP1-210ENST00000538120 PIP5K1BO14986 540 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 MAGEB3O15480 346 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 RB1P06400 928 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 ALDOCP09972 364 aaKnown RBP10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GALK1P51570 392 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 ART3Q13508 389 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 SQLEQ14534 574 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 TOMM20Q15388 145 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 TGFBIQ15582 683 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GPR33Q49SQ1 333 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 TMEM259Q4ZIN3 620 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 LRRC73Q5JTD7 316 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 LYPLAL1Q5VWZ2 237 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 ZFP1Q6P2D0 407 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 TXNDC11Q6PKC3 985 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 SBSNQ6UWP8 590 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 MACC1Q6ZN28 852 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 ADGRD2Q7Z7M1 963 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 SYVN1Q86TM6 617 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 NXPE1Q8N323 547 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 CHCHD4Q8N4Q1 142 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 KIAA1958Q8N8K9 716 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 TWIST2Q8WVJ9 160 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GAB3Q8WWW8 586 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 LRTOMTQ8WZ04 291 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 COQ10BQ9H8M1 238 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 ADA2Q9NZK5 511 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GIMAP2Q9UG22 337 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 GNPTGQ9UJJ9 305 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 FBXO10Q9UK96 956 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 TMPRSS11EQ9UL52 423 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 CHD9Q3L8U1 2897 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 PFDN1O60925 122 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 SLC25A14O95258 325 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-210ENST00000538120 POU2F2P09086 479 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 CISD3P0C7P0 127 aa10.56□□□□□ -0.72
CLIP1-210ENST00000538120 CLK1P49759 484 aaKnown RBP10.56□□□□□ -0.72
CLIP1-210ENST00000538120 SH3BGRP55822 239 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms