RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
CCDC7-208ENST00000537047 R3HCC1LQ7Z5L2 792 aaKnown RBP4.22□□□□□ -1.73
CCDC7-208ENST00000537047 ZNF554Q86TJ5 538 aa4.22□□□□□ -1.73
CCDC7-208ENST00000537047 SUSD6Q92537 303 aa4.22□□□□□ -1.73
CCDC7-208ENST00000537047 GAD1Q99259 594 aa4.22□□□□□ -1.73
CCDC7-208ENST00000537047 SOSTQ9BQB4 213 aa4.22□□□□□ -1.73
CCDC7-208ENST00000537047 ANGPTL3Q9Y5C1 460 aa4.22□□□□□ -1.73
CCDC7-208ENST00000537047 SOS1Q07889 1333 aaPredicted RBP4.21□□□□□ -1.73
CCDC7-208ENST00000537047 MSGN1A6NI15 193 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 ZNF195O14628 629 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 NDUFS3O75489 264 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 B3GALT5-AS1P59052 145 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 PTAR1Q7Z6K3 402 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-208ENST00000537047 LACC1Q8IV20 430 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 RAB42Q8N4Z0 105 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 HGH1Q9BTY7 390 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 UPF3AQ9H1J1 476 aaKnown RBP4.21□□□□□ -1.74
CCDC7-208ENST00000537047 ATP13A3Q9H7F0 1226 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 WASH6PQ9NQA3 447 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 SETD4Q9NVD3 440 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 FLRT3Q9NZU0 649 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 LUZP4Q9P127 313 aa4.21□□□□□ -1.74
CCDC7-208ENST00000537047 SPIN1Q9Y657 262 aaPredicted RBP4.21□□□□□ -1.74
CCDC7-208ENST00000537047 EPM2AB3EWF7 344 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 OGG1O15527 345 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 XBP1P17861 261 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 UGT1A4P22310 534 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 CCT5P48643 541 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 BIRC3Q13489 604 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 PEX6Q13608 980 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 HACE1Q8IYU2 909 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 SGCDQ92629 289 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 ELMOD3Q96FG2 381 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 NSL1Q96IY1 281 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 SLC22A12Q96S37 553 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 FUCA2Q9BTY2 467 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 RRP7BPQ9NSQ0 103 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 NUDT4Q9NZJ9 180 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 NPAP1Q9NZP6 1156 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 KCNE2Q9Y6J6 123 aa4.2□□□□□ -1.74
CCDC7-208ENST00000537047 HIST1H2ABP04908 130 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 HIST1H2ADP20671 130 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 MS4A2Q01362 244 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 KLHL26Q53HC5 615 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 GLDNQ6ZMI3 551 aaPredicted RBP4.19□□□□□ -1.74
CCDC7-208ENST00000537047 HIST3H2AQ7L7L0 130 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 OR2L2Q8NH16 312 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 DDOQ99489 341 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 ABHD6Q9BV23 337 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 RAB11FIP5Q9BXF6 653 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 PANK4Q9NVE7 773 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 WDR37Q9Y2I8 494 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 MYH15Q9Y2K3 1946 aa4.19□□□□□ -1.74
CCDC7-208ENST00000537047 ASTN2O75129 1339 aaPredicted RBP4.19□□□□□ -1.74
CCDC7-208ENST00000537047 LOC101059948A0A1B0GTJ6 334 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 A0A1W2PPH5 198 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 E9PI62 339 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 SOCS3O14543 225 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 TMCC2O75069 709 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 PIGNO95427 931 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 EFNA1P20827 205 aaPredicted RBP4.18□□□□□ -1.74
CCDC7-208ENST00000537047 OPRL1P41146 370 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 NIPAL4Q0D2K0 466 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 MED22Q15528 200 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 GCNT6Q5T4J0 391 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 ADALQ6DHV7 355 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 ARHGAP12Q8IWW6 846 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 FRMD1Q8N878 549 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 MAPKAPK5-AS1Q8N8E1 139 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 PRSS33Q8NF86 280 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 AZIN2Q96A70 460 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 NSMCE3Q96MG7 304 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 C1QTNF1Q9BXJ1 281 aa4.18□□□□□ -1.74
CCDC7-208ENST00000537047 PRSS51A0A1B0GVH4 220 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 A0A1W2PRB8 838 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 A6NLC8 198 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 CA4P22748 312 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 NMBRP28336 390 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 RBMS1P29558 406 aaKnown RBP4.17□□□□□ -1.74
CCDC7-208ENST00000537047 LIMK2P53671 638 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 LRMPQ12912 555 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 GAGE2BQ13066 116 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 NFATC2Q13469 925 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 TBCEQ15813 527 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-208ENST00000537047 HLA-BQ31612 363 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 GAGE2EQ4V326 116 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 GAGE2AQ6NT46 116 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 HOGA1Q86XE5 327 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 ZNF584Q8IVC4 421 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 DYRK2Q92630 601 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 GTF3AQ92664 365 aaKnown RBP4.17□□□□□ -1.74
CCDC7-208ENST00000537047 NUDCD1Q96RS6 583 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 DGCR6LQ9BY27 220 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 GAGE2DQ9UEU5 116 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 SLC13A4Q9UKG4 626 aa4.17□□□□□ -1.74
CCDC7-208ENST00000537047 LRRFIP2Q9Y608 721 aaKnown RBP4.17□□□□□ -1.74
CCDC7-208ENST00000537047 A0A1W2PPR1 153 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 NXPH2O95156 264 aa4.16□□□□□ -1.74
CCDC7-208ENST00000537047 MMP12P39900 470 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms