RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 P2RY11Q96G91 374 aa6.5□□□□□ -1.37
CCDC60-203ENST00000536742 SENP8Q96LD8 212 aa6.5□□□□□ -1.37
CCDC60-203ENST00000536742 CEP295NLQ96MC4 621 aa6.5□□□□□ -1.37
CCDC60-203ENST00000536742 THAP7Q9BT49 309 aaPredicted RBP6.5□□□□□ -1.37
CCDC60-203ENST00000536742 POLR3FQ9H1D9 316 aaPredicted RBP6.5□□□□□ -1.37
CCDC60-203ENST00000536742 AKAP7Q9P0M2 348 aaPredicted RBP6.5□□□□□ -1.37
CCDC60-203ENST00000536742 TUBGCP4Q9UGJ1 667 aa6.5□□□□□ -1.37
CCDC60-203ENST00000536742 CSNK1G3Q9Y6M4 447 aa6.5□□□□□ -1.37
CCDC60-203ENST00000536742 PRRC2AP48634 2157 aaKnown RBP6.5□□□□□ -1.37
CCDC60-203ENST00000536742 TDRD6O60522 2096 aaKnown RBP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 TGP01266 2768 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 A0A0G2JK05 382 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 A0A1B0GUH1 482 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 ZNF840PA6NDX5 716 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 C10orf142B7Z368 130 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 D6RAR5 112 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 AGPSO00116 658 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 LATO43561 262 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 PROP1O75360 226 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 F9P00740 461 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 OAS1P00973 400 aaKnown RBP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 TMEM225BP0DP42 221 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 HTR7P34969 479 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 ETV5P41161 510 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 NANOS3P60323 173 aaKnown RBP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 TSPY1Q01534 308 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 BLMHQ13867 455 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 PTK2BQ14289 1009 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 ZACNQ401N2 412 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 RAP1GAP2Q684P5 730 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 ZNF776Q68DI1 518 aaPredicted RBP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 HIST2H2BDQ6DRA6 164 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 JMJD6Q6NYC1 403 aaPredicted RBP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 RASGRP3Q8IV61 690 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC60-203ENST00000536742 FAM71BQ8TC56 605 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 TMEM158Q8WZ71 300 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 OVCA2Q8WZ82 227 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 SARAFQ96BY9 339 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 CTHRC1Q96CG8 243 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 PRR25Q96S07 402 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 AGAP2Q99490 1192 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 ELOVL2Q9NXB9 296 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 FBXL12Q9NXK8 326 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 BARHL2Q9NY43 387 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 FZD4Q9ULV1 537 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 NFU1Q9UMS0 254 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 PCDHA12Q9UN75 941 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 TNFSF13BQ9Y275 285 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 POLEQ07864 2286 aa6.49□□□□□ -1.37
CCDC60-203ENST00000536742 TARSL2A2RTX5 802 aaKnown RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 SYT5O00445 386 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 IFRD1O00458 451 aaPredicted RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 JTBO76095 146 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 WDR47O94967 919 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 ERBB2P04626 1255 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 ITGA5P08648 1049 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 ELFN1P0C7U0 828 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 CREB1P16220 341 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 PECAM1P16284 738 aaPredicted RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 NPPBP16860 134 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 GPD1P21695 349 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 CYP2F1P24903 491 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 ADRA1DP25100 572 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 EFNA5P52803 228 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 PMS2P54278 862 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 COL10A1Q03692 680 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 Q4G0T1 1027 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 PCID2Q5JVF3 399 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 TMTC4Q5T4D3 741 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 TPGS1Q6ZTW0 290 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 HPS6Q86YV9 775 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 STARD8Q92502 1023 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 EID2BQ96D98 161 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 SNRNP40Q96DI7 357 aaKnown RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 C19orf60Q96EN9 201 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 C18orf12Q96KH6 178 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 RANBP9Q96S59 729 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 LXNQ9BS40 222 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 PABPC3Q9H361 631 aaKnown RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 GAR1Q9NY12 217 aaKnown RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 WRAP73Q9P2S5 460 aaPredicted RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 ORC3Q9UBD5 711 aaPredicted RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 UBQLN1Q9UMX0 589 aaKnown RBP6.48□□□□□ -1.37
CCDC60-203ENST00000536742 CUBNO60494 3623 aa6.48□□□□□ -1.37
CCDC60-203ENST00000536742 ABCA4P78363 2273 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 PRAMEF26H0Y7S4 382 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 H7C1Q1 480 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 CES2O00748 559 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 INPP4BO15327 924 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 ZSCAN9O15535 394 aaPredicted RBP6.47□□□□□ -1.37
CCDC60-203ENST00000536742 MSI1O43347 362 aaKnown RBP6.47□□□□□ -1.37
CCDC60-203ENST00000536742 KRT86O43790 486 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 RAD1O60671 282 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 DPM1O60762 260 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 RNASEH1O60930 286 aaKnown RBP6.47□□□□□ -1.37
CCDC60-203ENST00000536742 NEBLO76041 1014 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 REC8O95072 547 aa6.47□□□□□ -1.37
CCDC60-203ENST00000536742 VNN1O95497 513 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms