RNA–Protein interactions for RNA: ENST00000535515.5

C12orf56-202, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-202ENST00000535515 CNOT1A5YKK6 2376 aaKnown RBP3.39□□□□□ -1.87
C12orf56-202ENST00000535515 PTPRCP08575 1304 aa3.39□□□□□ -1.87
C12orf56-202ENST00000535515 PIEZO2Q9H5I5 2752 aa3.39□□□□□ -1.87
C12orf56-202ENST00000535515 SMG1Q96Q15 3661 aaKnown RBP3.39□□□□□ -1.87
C12orf56-202ENST00000535515 METP08581 1390 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 SPTAN1Q13813 2472 aaKnown RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 CCDC196A0A1B0GTZ2 297 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 CTAGE9A4FU28 777 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 EIF3CLB5ME19 914 aaKnown RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 H3BQ06 376 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 PRKNO60260 465 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 CTAGE8P0CG41 777 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 PRSS56P0CW18 603 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 UBL4AP11441 157 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 RARSP54136 660 aaKnown RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 TMEM35AQ53FP2 167 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 WDR38Q5JTN6 314 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 FRG2Q64ET8 278 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 BRAT1Q6PJG6 821 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 GPR180Q86V85 440 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 ARMC8Q8IUR7 673 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 APLFQ8IW19 511 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 MAP7D3Q8IWC1 876 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 CTAGE4Q8IX94 777 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 SPAG16Q8N0X2 631 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 TRIM58Q8NG06 486 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 TMEM190Q8WZ59 177 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 MMABQ96EY8 250 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 WDFY2Q96P53 400 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 QRFPRQ96P65 431 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 PSMD1Q99460 953 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 EGFL8Q99944 293 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 PIGMQ9H3S5 423 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 POLR1BQ9H9Y6 1135 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 UBN1Q9NPG3 1134 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 SLC52A3Q9NQ40 469 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 ASAH2Q9NR71 780 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 C9orf78Q9NZ63 289 aaPredicted RBP3.38□□□□□ -1.87
C12orf56-202ENST00000535515 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 C2CD2Q9Y426 696 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 RELNP78509 3460 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 LY75O60449 1722 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 SLIT3O75094 1523 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 TTC21AQ8NDW8 1320 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 ARHGEF10O15013 1369 aa3.38□□□□□ -1.87
C12orf56-202ENST00000535515 NOTCH2Q04721 2471 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 NAV3Q8IVL0 2385 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 GVINP1Q7Z2Y8 2422 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 TTC36A6NLP5 189 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 TMEM178BH3BS89 294 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 M0QZ24 198 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 PSMD14O00487 310 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 HOXB5P09067 269 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 FOSL2P15408 326 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 ZNF182P17025 639 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 POLR2CP19387 275 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 AZU1P20160 251 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 APOBEC1P41238 236 aaKnown RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 RPL24P83731 157 aaKnown RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 DCST1Q5T197 706 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 C18orf63Q68DL7 685 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 ATG9AQ7Z3C6 839 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 TRPT1Q86TN4 253 aaKnown RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 ADSSL1Q8N142 457 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 WDR20Q8TBZ3 569 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 INTS12Q96CB8 462 aaKnown RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 PRKRIP1Q9H875 184 aaPredicted RBP3.37□□□□□ -1.87
C12orf56-202ENST00000535515 COPG2Q9UBF2 871 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 FBXL2Q9UKC9 423 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 SLC13A4Q9UKG4 626 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 CLIC4Q9Y696 253 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 VPS13AQ96RL7 3174 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 TEX15Q9BXT5 2789 aa3.37□□□□□ -1.87
C12orf56-202ENST00000535515 COL4A6Q14031 1691 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 TROQ12816 1431 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 CASKIN1Q8WXD9 1431 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 TOGARAM1Q9Y4F4 1720 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 MBD5Q9P267 1494 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 CACNA1HO95180 2353 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 A0A1W2PPH5 198 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 A0A1W2PQF6 199 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 ANKRD28O15084 1053 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 EIF3DO15371 548 aaKnown RBP eCLIP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 CIDEAO60543 219 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 SPARCP09486 303 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 FAM106CPP0CH98 169 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 ERVK-10P10266 1014 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 GNB3P16520 340 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 SP100P23497 879 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 CLK1P49759 484 aaKnown RBP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 CASP6P55212 293 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 OLR1P78380 273 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 IRX6P78412 446 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 FOXD4Q12950 439 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 DECR1Q16698 335 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 FAM53AQ6NSI3 398 aaPredicted RBP3.36□□□□□ -1.87
C12orf56-202ENST00000535515 CYP20A1Q6UW02 462 aa3.36□□□□□ -1.87
C12orf56-202ENST00000535515 TDHQ8IZJ6 230 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms