RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 OR4E2Q8NGC2 313 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 LCN9Q8WX39 176 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 KLHL6Q8WZ60 621 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 UBXN4Q92575 508 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 LINC00615Q96LM1 132 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 HGH1Q9BTY7 390 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 SLC12A9Q9BXP2 914 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 RAB33BQ9H082 229 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 TRIT1Q9H3H1 467 aaKnown RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 KIR3DX1Q9H7L2 352 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 SOHLH2Q9NX45 425 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 EPHA6Q9UF33 1036 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 SLC2A6Q9UGQ3 507 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 IL17BQ9UHF5 180 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 TMEM184BQ9Y519 407 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 HEBP2Q9Y5Z4 205 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 RPS6KL1Q9Y6S9 549 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 SMG1Q96Q15 3661 aaKnown RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 SEC16AO15027 2179 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 IGLV3-16A0A075B6K0 115 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 HEATR9A2RTY3 570 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 TLCD2A6NGC4 264 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 MROH6A6NGR9 719 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 H7C0S8 307 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 NRDCO43847 1150 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 CEP104O60308 925 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 KATNA1O75449 491 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 SPAG6O75602 509 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 DLGAP3O95886 979 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 FOLR1P15328 257 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 ITGB6P18564 788 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 CDH3P22223 829 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 NDUFS1P28331 727 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PDHA2P29803 388 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 DLSTP36957 453 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 TERF1P54274 439 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 CSE1LP55060 971 aaKnown RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 SESN2P58004 480 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 ABHD18Q0P651 414 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PRKG2Q13237 762 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 BOP1Q14137 746 aaKnown RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 IL11RAQ14626 422 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 KCTD19Q17RG1 926 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 SYTL3Q4VX76 610 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 CAPRIN2Q6IMN6 1127 aaKnown RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 NAPRTQ6XQN6 538 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PPP1R3BQ86XI6 285 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 LRRC8AQ8IWT6 810 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PPHLN1Q8NEY8 458 aaKnown RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 OR6P1Q8NGX9 317 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 ELMO1Q92556 727 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 HDAC10Q969S8 669 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PPM1MQ96MI6 270 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 CD180Q99467 661 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 C19orf43Q9BQ61 176 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 EFHD1Q9BUP0 239 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 SPRY4Q9C004 299 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 SRMSQ9H3Y6 488 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PDE7BQ9NP56 450 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PAK5Q9P286 719 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 RARRES3Q9UL19 164 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 HEMK1Q9Y5R4 338 aaPredicted RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 MRPS18BQ9Y676 258 aaKnown RBP10.17□□□□□ -0.78
CAPN1-225ENST00000533704 PRSS21Q9Y6M0 314 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 CCDC88CQ9P219 2028 aa10.17□□□□□ -0.78
CAPN1-225ENST00000533704 C17orf113A0A1B0GUU1 675 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 SUN1O94901 812 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 AP2A2O94973 939 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 GOT2P00505 430 aaKnown RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 FGGP02679 453 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 FTH1P02794 183 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 NTRK1P04629 796 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CCNYL3P0C7X3 344 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 FGF5P12034 268 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 PLA2G2AP14555 144 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 TCN2P20062 427 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 ADRA1DP25100 572 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CXCR5P32302 372 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 FOXN2P32314 431 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 RPL22P35268 128 aaKnown RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 STAT5AP42229 794 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 NSG1P42857 185 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 KCNJ1P48048 391 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 KPNA2P52292 529 aaKnown RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 PRAMEP78395 509 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 HSD11B2P80365 405 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 BASP1P80723 227 aaKnown RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CCZ1BP86790 482 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CCZ1P86791 482 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 NFKB2Q00653 900 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 ACY1Q03154 408 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CDC20Q12834 499 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 SEMA5AQ13591 1074 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 LAMB3Q13751 1172 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 ITIH4Q14624 930 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 SIX1Q15475 284 aaPredicted RBP10.16□□□□□ -0.78
CAPN1-225ENST00000533704 GPR19Q15760 415 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 CCNG2Q16589 344 aa10.16□□□□□ -0.78
CAPN1-225ENST00000533704 DEFB109BQ30KR1 87 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms