RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ZNF460Q14592 562 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 CLCA4Q14CN2 919 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 C14orf28Q4W4Y0 310 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 ACSBG2Q5FVE4 666 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 PLEKHS1Q5SXH7 462 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 RAPH1Q70E73 1250 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 VRK3Q8IV63 474 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 NAGSQ8N159 534 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 DEFB124Q8NES8 71 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 OR2W6PQ8NHA6 318 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 SLC37A2Q8TED4 501 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 ZBTB9Q96C00 473 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 TSPAN17Q96FV3 270 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 FERD3LQ96RJ6 166 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 INSM2Q96T92 566 aaPredicted RBP17.08■□□□□ 0.32
NXF1-216ENST00000533499 STN1Q9H668 368 aaKnown RBP17.08■□□□□ 0.32
NXF1-216ENST00000533499 TBK1Q9UHD2 729 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 DHRS7Q9Y394 339 aa17.08■□□□□ 0.32
NXF1-216ENST00000533499 ZNF292O60281 2723 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 CCDC151A5D8V7 595 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 OR5K4A6NMS3 321 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 RHPN2P1A8MT19 583 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 PHGDHO43175 533 aaKnown RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 NOBOXO60393 691 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 KRT38O76015 456 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 BRAFP15056 766 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 STMN1P16949 149 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 FDXRP22570 491 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 SKIV2L2P42285 1042 aaKnown RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 SERPINB9P50453 376 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 POU4F1Q01851 419 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 PLOD1Q02809 727 aaPredicted RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 ILF2Q12905 390 aaKnown RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 RPA4Q13156 261 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 RPE65Q16518 533 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 LGSNQ5TDP6 509 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 AGAP9Q5VTM2 703 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 IYDQ6PHW0 289 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 PAQR3Q6TCH7 311 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 SLC9B2Q86UD5 537 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 ZNF761Q86XN6 746 aaPredicted RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 ARL14Q8N4G2 192 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 PHC3Q8NDX5 983 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 GIMAP7Q8NHV1 300 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 CD200R1Q8TD46 325 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 GPR22Q99680 433 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 OR52A5Q9H2C5 316 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 SLC32A1Q9H598 525 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 SYNDIG1Q9H7V2 258 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 LATS2Q9NRM7 1088 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 EVA1BQ9NVM1 165 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 ARGLU1Q9NWB6 273 aaPredicted RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 PCOLCE2Q9UKZ9 415 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 PADI4Q9UM07 663 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 RUVBL2Q9Y230 463 aaKnown RBP17.07■□□□□ 0.32
NXF1-216ENST00000533499 PLAAQ9Y263 795 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 MED16Q9Y2X0 877 aa17.07■□□□□ 0.32
NXF1-216ENST00000533499 KIR2DS5A0A0G2JLQ3 304 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 PRAMEF33A0A0G2JMD5 474 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 A0A0G2JNG1 304 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 A6NCN8 305 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 KIR2DS3K7RE56 304 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 GPC4O75487 556 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 KRT37O76014 449 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 MAPK9P45984 424 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 RGS4P49798 205 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 LIMK1P53667 647 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 DNAJC3Q13217 504 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 KIR2DS5Q14953 304 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 RSPO4Q2I0M5 234 aaPredicted RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 ZNF658BQ4V348 819 aaPredicted RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 OGFOD3Q6PK18 319 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 ABRAXAS1Q6UWZ7 409 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 XKR5Q6UX68 686 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 WASH2PQ6VEQ5 465 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 EFL1Q7Z2Z2 1120 aaKnown RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 CMC1Q7Z7K0 106 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 PDZD3Q86UT5 571 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 CEP97Q8IW35 865 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 SLC22A15Q8IZD6 547 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 Q8N9G6 341 aaPredicted RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 EPS8L3Q8TE67 593 aaKnown RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 DCAKDQ8WVC6 231 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 LINGO1Q96FE5 620 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 FOPNLQ96NB1 174 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 GPAMQ9HCL2 828 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 WASH6PQ9NQA3 447 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 ZNF624Q9P2J8 865 aaPredicted RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 CPNE7Q9UBL6 633 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 ASF1AQ9Y294 204 aa17.06■□□□□ 0.32
NXF1-216ENST00000533499 TDRKHQ9Y2W6 561 aaKnown RBP17.06■□□□□ 0.32
NXF1-216ENST00000533499 PRR19A6NJB7 356 aa17.05■□□□□ 0.32
NXF1-216ENST00000533499 TRIM49D1C9J1S8 452 aa17.05■□□□□ 0.32
NXF1-216ENST00000533499 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
NXF1-216ENST00000533499 SLC19A1P41440 591 aa17.05■□□□□ 0.32
NXF1-216ENST00000533499 DUSP3P51452 185 aaPredicted RBP17.05■□□□□ 0.32
NXF1-216ENST00000533499 IL2P60568 153 aa17.05■□□□□ 0.32
NXF1-216ENST00000533499 TIAL1Q01085 375 aaKnown RBP eCLIP17.05■□□□□ 0.32
NXF1-216ENST00000533499 HHEXQ03014 270 aa17.05■□□□□ 0.32
NXF1-216ENST00000533499 PRKG2Q13237 762 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms