RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
TGFBR3-211ENST00000533370 ZNHIT2Q9UHR6 403 aa12.03□□□□□ -0.48
TGFBR3-211ENST00000533370 SLC17A4Q9Y2C5 497 aa12.03□□□□□ -0.48
TGFBR3-211ENST00000533370 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.03□□□□□ -0.48
TGFBR3-211ENST00000533370 NEMP2A6NFY4 417 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 STX16-NPEPL1H3BU86 382 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 STX16O14662 325 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 ITM2AO43736 263 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 SNX3O60493 162 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 SNX2O60749 519 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 NDUFS2O75306 463 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 FSBPO95073 299 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 MATN4O95460 622 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 HSPA4LO95757 839 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 IGHV4-34P06331 123 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 DCNP07585 359 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 TROVE2P10155 538 aaKnown RBP eCLIP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 VCLP18206 1134 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 HK3P52790 923 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 HERVK_113P63132 956 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 GALNT1Q10472 559 aaPredicted RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 RCN2Q14257 317 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 TGFBIQ15582 683 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 PPP1R3AQ16821 1122 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 ZNF678Q5SXM1 525 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 METTL2BQ6P1Q9 378 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 SBSNQ6UWP8 590 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 C11orf96Q7Z7L8 435 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 RASGRP3Q8IV61 690 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 VRK3Q8IV63 474 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 SLC22A15Q8IZD6 547 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 FBXO39Q8N4B4 442 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 PTGR2Q8N8N7 351 aaPredicted RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 HM13Q8TCT9 377 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 MCOLN3Q8TDD5 553 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 SKA2Q8WVK7 121 aaPredicted RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 BMFQ96LC9 184 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 GPR174Q9BXC1 333 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 ERVK-6Q9BXR3 956 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 ILKAPQ9H0C8 392 aaPredicted RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 DPEP2Q9H4A9 486 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 EML4Q9HC35 981 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 CYP4F12Q9HCS2 524 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 FZD3Q9NPG1 666 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 TNPO3Q9Y5L0 923 aaKnown RBP12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 TRIOO75962 3097 aa12.02□□□□□ -0.49
TGFBR3-211ENST00000533370 PLXNB3Q9ULL4 1909 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 POM121BA6NF01 834 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 TMEM202A6NGA9 273 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 H3BM21 787 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 TNFRSF10CO14798 259 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 FFAR2O15552 330 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 HIST1H2AGP0C0S8 130 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 HIST1H2ADP20671 130 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 HTR1BP28222 390 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 HOXA6P31267 233 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 RPIAP49247 311 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 CLDN2P57739 230 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 PFN3P60673 137 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 CDKL1Q00532 357 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 ABRQ12979 859 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 NFATC4Q14934 902 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 USP39Q53GS9 565 aaKnown RBP12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 UNC50Q53HI1 259 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 METRNLQ641Q3 311 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 SULT1C3Q6IMI6 304 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 TTC23LQ6PF05 361 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 CRTC3Q6UUV7 619 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 UBE2R2Q712K3 238 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 SPATA21Q7Z572 469 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 OXR1Q8N573 874 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 EXT2Q93063 718 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 BIRC7Q96CA5 298 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 SEC16BQ96JE7 1060 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 HIST1H2AHQ96KK5 128 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 FOPNLQ96NB1 174 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 HIST1H2AJQ99878 128 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 PLCD4Q9BRC7 762 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 TIMM29Q9BSF4 260 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 H2AFJQ9BTM1 129 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 C1QTNF3Q9BXJ4 246 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 TRIM55Q9BYV6 548 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 C20orf27Q9GZN8 174 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 ZNF395Q9H8N7 513 aaPredicted RBP12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 COG4Q9H9E3 785 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 DLGAP2Q9P1A6 1054 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 KLHL14Q9P2G3 628 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 GULP1Q9UBP9 304 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 PTBP2Q9UKA9 531 aaKnown RBP12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 ADAMTS6Q9UKP5 1117 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 ACSL5Q9ULC5 683 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 RAP2CQ9Y3L5 183 aa12.01□□□□□ -0.49
TGFBR3-211ENST00000533370 LRRK1Q38SD2 2015 aa12□□□□□ -0.49
TGFBR3-211ENST00000533370 PABPN1LA6NDY0 278 aaKnown RBP12□□□□□ -0.49
TGFBR3-211ENST00000533370 METTL12A8MUP2 240 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 323.2 ms