RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 KCNK4Q9NYG8 393 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 MPP6Q9NZW5 540 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 KLHL8Q9P2G9 620 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 HECAQ9UBI9 543 aaPredicted RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 ZNF212Q9UDV6 495 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 STAP1Q9ULZ2 295 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 NEU3Q9UQ49 428 aa8.14□□□□□ -1.11
NEDD8-207ENST00000533242 FCF1Q9Y324 198 aaKnown RBP8.14□□□□□ -1.11
NEDD8-207ENST00000533242 A0A1W2PQM1 296 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 LRIG2O94898 1065 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PROCP04070 461 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ESRRAP11474 423 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 HGFP14210 728 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PTDSS1P48651 473 aaKnown RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 SERPINB9P50453 376 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 RASSF2P50749 326 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 TPI1P60174 286 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 GNA12Q03113 381 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 STX3Q13277 289 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 RCN2Q14257 317 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 KRT72Q14CN4 511 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CNTD1Q8N815 330 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 TP53I13Q8NBR0 393 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 GIMAP7Q8NHV1 300 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ZNF669Q96BR6 464 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CCDC106Q9BWC9 280 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 OSBPL1AQ9BXW6 950 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CPEB1Q9BZB8 566 aaKnown RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 SLC25A18Q9H1K4 315 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CHRAC1Q9NRG0 131 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PNPOQ9NVS9 261 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ZFATQ9P243 1243 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 GPR34Q9UPC5 381 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ITM2BQ9Y287 266 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 DNAJC16Q9Y2G8 782 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PRAMEF33A0A0G2JMD5 474 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PPP1R12AO14974 1030 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 AREL1O15033 823 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PRAMEF10O60809 474 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 TM7SF2O76062 418 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 RASGRP1O95267 797 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 AP2A1O95782 977 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CD160O95971 181 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CELA2BP08218 269 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 GP1BBP13224 206 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CTSEP14091 401 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 NFKB1P19838 968 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CCNG1P51959 295 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 SESN3P58005 492 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 TLE1Q04724 770 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ZFP36L1Q07352 338 aaKnown RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PPIDQ08752 370 aaKnown RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 HSP90AA5PQ58FG0 334 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 WASHC2DQ5SRD0 308 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 FAM91A1Q658Y4 838 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ATG16L1Q676U5 607 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 NAPRTQ6XQN6 538 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 VASH2Q86V25 355 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ZFAND4Q86XD8 727 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 GKN2Q86XP6 184 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 RYBPQ8N488 228 aaPredicted RBP8.13□□□□□ -1.11
NEDD8-207ENST00000533242 TEX9Q8N6V9 391 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 CXorf40AQ8TE69 158 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 HAPLN3Q96S86 360 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 EPAS1Q99814 870 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ZYG11BQ9C0D3 744 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 YY1AP1Q9H869 796 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 SNX15Q9NRS6 342 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 NDFIP2Q9NV92 336 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 OR12D3Q9UGF7 316 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 PCDHB11Q9Y5F2 797 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 ATMQ13315 3056 aa8.13□□□□□ -1.11
NEDD8-207ENST00000533242 B2RBV5 119 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 ZNF195O14628 629 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 BIRC5O15392 142 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 SORBS2O94875 1100 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 ETFBP38117 255 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 GARSP41250 739 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 SLC1A6P48664 564 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 HK3P52790 923 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 SNRPD1P62314 119 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 SARNPP82979 210 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 PDE1BQ01064 536 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 PEX6Q13608 980 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CLCA4Q14CN2 919 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 RCN1Q15293 331 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 ALG11Q2TAA5 492 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 BZW1Q7L1Q6 419 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 TMEM135Q86UB9 458 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 DTX1Q86Y01 620 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CRLF3Q8IUI8 442 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CCNJLQ8IV13 435 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 SPATA22Q8NHS9 363 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 DTX3LQ8TDB6 740 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 USP7Q93009 1102 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 NTAN1Q96AB6 310 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 FAM167BQ9BTA0 163 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 SHCBP1LQ9BZQ2 653 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 TM6SF2Q9BZW4 377 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 MBNL1Q9NR56 388 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms