RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HIF1AQ16665 826 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 HP1BP3Q5SSJ5 553 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 LRRC8BQ6P9F7 803 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 KDELC1Q6UW63 502 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 HDXQ7Z353 690 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 PDIK1LQ8N165 341 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 GALNT6Q8NCL4 622 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 PNPLA2Q96AD5 504 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 TADA1Q96BN2 335 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 SERPINB12Q96P63 405 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 PPP1R2P1Q96PQ5 205 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 MGME1Q9BQP7 344 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 FUT8Q9BYC5 575 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 UNKQ9C0B0 810 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 POLR1EQ9GZS1 481 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 LRRC40Q9H9A6 602 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 XAB2Q9HCS7 855 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 PHPT1Q9NRX4 125 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 HAUS2Q9NVX0 235 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 GOLGA6AQ9NYA3 693 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 G3BP2Q9UN86 482 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 DOCK4Q8N1I0 1966 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 OTOGQ6ZRI0 2925 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 C21orf140B9A014 251 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 E7ESA3 106 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 INSIG1O15503 277 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 BANF1O75531 89 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 PIGNO95427 931 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 AGTP01019 485 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 MT-ND3P03897 115 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 CEACAM5P06731 702 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 ELFN1P0C7U0 828 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 MLNP12872 115 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 HSD17B3P37058 310 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 SCNN1BP51168 640 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 CCL11P51671 97 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 CTBSQ01459 385 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 FOXM1Q08050 763 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 NSUN2Q08J23 767 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 MPP3Q13368 585 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 OLIG2Q13516 323 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 CASP8Q14790 479 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 UAP1Q16222 522 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 KYNUQ16719 465 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 DNAJC21Q5F1R6 531 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF534Q76KX8 674 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 TRMT10CQ7L0Y3 403 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 RELL1Q8IUW5 271 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 Q8NA96 180 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 IPMKQ8NFU5 416 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 OR52K1Q8NGK4 314 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 UBLCP1Q8WVY7 318 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 NCSTNQ92542 709 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 C9orf72Q96LT7 481 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 TBL1YQ9BQ87 522 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 APOL2Q9BQE5 337 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 FICDQ9BVA6 458 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 NOD2Q9HC29 1040 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 NINJ2Q9NZG7 142 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 LHX3Q9UBR4 397 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 PADI1Q9ULC6 663 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 SUFUQ9UMX1 484 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 ANKRD36A6QL64 1941 aa11.11□□□□□ -0.63
TRAPPC4-213ENST00000533149 ANKUB1A6NFN9 424 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 SDR42E2A6NKP2 422 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 FUCA1P04066 466 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ANKRD34CP0C6C1 535 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF28P17035 718 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 TPH1P17752 444 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ADRA1AP35348 466 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ACTR1BP42025 376 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 NPY2RP49146 381 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 PER3P56645 1201 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 SESN2P58004 480 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ACTR1AP61163 376 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 IL11RAQ14626 422 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 FASTKD3Q14CZ7 662 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 PCSK7Q16549 785 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 UGT8Q16880 541 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ALG1LQ6GMV1 187 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 RANBP10Q6VN20 620 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 LIPIQ6XZB0 460 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 SRLQ86TD4 932 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 LINC00523Q86TU6 105 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF761Q86XN6 746 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ANKMY2Q8IV38 441 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 IGDCC3Q8IVU1 814 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZBED8Q8IZ13 594 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 AGGF1Q8N302 714 aaeCLIP11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 PYROXD1Q8WU10 500 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 SH3KBP1Q96B97 665 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 EXOC2Q96KP1 924 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 MRGPRX2Q96LB1 330 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 SIGLEC10Q96LC7 697 aa11.1□□□□□ -0.63
TRAPPC4-213ENST00000533149 NSMCE3Q96MG7 304 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms