RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CHRAC1Q9NRG0 131 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 HRASLS2Q9NWW9 162 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 SEMA5BQ9P283 1151 aa29.53■■■□□ 2.32
SSSCA1-207ENST00000533115 ATMQ13315 3056 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 AP3B1O00203 1094 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 ZSCAN12O43309 604 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 PREPP48147 710 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 SH3BP2P78314 561 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 PRAMEP78395 509 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 CERS6Q6ZMG9 384 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 ZNF534Q76KX8 674 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 UBXN4Q92575 508 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 TTC9Q92623 222 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 MS4A14Q96JA4 679 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 FERD3LQ96RJ6 166 aa29.52■■■□□ 2.32
SSSCA1-207ENST00000533115 FTH1P02794 183 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 NELFEP18615 380 aaKnown RBP29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 NPY2RP49146 381 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 FASTKD1Q53R41 847 aaKnown RBP29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 TAF1BQ53T94 588 aaPredicted RBP29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 DNTTIP2Q5QJE6 756 aaKnown RBP29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 ZSCAN1Q8NBB4 408 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 ACVR1CQ8NER5 493 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 WBP1Q96G27 269 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 OR6C1Q96RD1 312 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 CD180Q99467 661 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 IL22Q9GZX6 179 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 KCNF1Q9H3M0 494 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 BFARQ9NZS9 450 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 TTC7AQ9ULT0 858 aaPredicted RBP29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 TMEM184BQ9Y519 407 aaPredicted RBP29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 PCDHGA4Q9Y5G9 962 aa29.51■■■□□ 2.31
SSSCA1-207ENST00000533115 IGHV5-51A0A0C4DH38 117 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 OR6C74A6NCV1 312 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 LIN7AO14910 233 aaPredicted RBP29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 OR1I1O60431 355 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 STK17BO94768 372 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 OR56A5P0C7T3 313 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 WT1P19544 449 aaPredicted RBP29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 TPSB2P20231 275 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 CRADDP78560 199 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 CDK16Q00536 496 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 IL11RAQ14626 422 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 TRIP13Q15645 432 aaPredicted RBP29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 TPSAB1Q15661 275 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 KCTD19Q17RG1 926 aaPredicted RBP29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 ARMC6Q6NXE6 501 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 NLGN4XQ8N0W4 816 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 SLC35F6Q8N357 371 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 NLGN4YQ8NFZ3 816 aaPredicted RBP29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 ELMO1Q92556 727 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 SLC41A2Q96JW4 573 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 MAP3K3Q99759 626 aa29.5■■■□□ 2.31
SSSCA1-207ENST00000533115 MAP4P27816 1152 aaKnown RBP29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 TTC27Q6P3X3 843 aa29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 OR4E2Q8NGC2 313 aa29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 MAGOHBQ96A72 148 aaKnown RBP29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 NAP1L3Q99457 506 aaPredicted RBP29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 AP1M1Q9BXS5 423 aa29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 MVB12BQ9H7P6 319 aa29.49■■■□□ 2.31
SSSCA1-207ENST00000533115 UBA6A0AVT1 1052 aaPredicted RBP29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 TLCD2A6NGC4 264 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 DLGAP3O95886 979 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 PPARGP37231 505 aaPredicted RBP29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 SEMA3AQ14563 771 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 LRRC8BQ6P9F7 803 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 TIPARPQ7Z3E1 657 aaKnown RBP29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 PHC3Q8NDX5 983 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 LCN9Q8WX39 176 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 TFGQ92734 400 aaPredicted RBP29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 TREX1Q9NSU2 369 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 CATSPERZQ9NTU4 200 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 ANAPC5Q9UJX4 755 aa29.48■■■□□ 2.31
SSSCA1-207ENST00000533115 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 TCRBV7S3A2A0A539 114 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 F8W8V4 182 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 KRT14P02533 472 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 LIFP15018 202 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 VPS41P49754 854 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 GPS1Q13098 491 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 BOP1Q14137 746 aaKnown RBP29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 AARS2Q5JTZ9 985 aaKnown RBP29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 CYB5D1Q6P9G0 228 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 KMT5CQ86Y97 462 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 SIDT2Q8NBJ9 832 aaKnown RBP29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 TRIT1Q9H3H1 467 aaKnown RBP29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 SRMSQ9H3Y6 488 aa29.47■■■□□ 2.31
SSSCA1-207ENST00000533115 ATRXP46100 2492 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 PGRMC1O00264 195 aaKnown RBP29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 FGF5P12034 268 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 POLR2CP19387 275 aaPredicted RBP29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 MGAT1P26572 445 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 ARCN1P48444 511 aaKnown RBP29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 TERF1P54274 439 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 PRKAA1Q13131 559 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 KCNJ11Q14654 390 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 BRD3Q15059 726 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 CYP1B1Q16678 543 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 OR52E1Q8NGJ3 308 aa29.46■■■□□ 2.31
SSSCA1-207ENST00000533115 ELMO2Q96JJ3 720 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms