RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 DAAM2Q86T65 1068 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 GALNT16Q8N428 558 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 LILRA3Q8N6C8 439 aaPredicted RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 CLEC1AQ8NC01 280 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 FAF2Q96CS3 445 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 XPO4Q9C0E2 1151 aaKnown RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 SPRTNQ9H040 489 aaPredicted RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 KIR3DX1Q9H7L2 352 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 LATS2Q9NRM7 1088 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 C1GALT1Q9NS00 363 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 SAE1Q9UBE0 346 aaPredicted RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 ACSL5Q9ULC5 683 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 BTRCQ9Y297 605 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 NTNG1Q9Y2I2 539 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 PKP3Q9Y446 797 aa12.66□□□□□ -0.38
COPB1-209ENST00000533096 TNRC6AQ8NDV7 1962 aaKnown RBP12.66□□□□□ -0.38
COPB1-209ENST00000533096 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 BTN3A3O00478 584 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 PPP1R12AO14974 1030 aaPredicted RBP12.65□□□□□ -0.38
COPB1-209ENST00000533096 STX7O15400 261 aaKnown RBP12.65□□□□□ -0.38
COPB1-209ENST00000533096 TYRO3Q06418 890 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 PRKG2Q13237 762 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 SSPNQ14714 243 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 MYBPC3Q14896 1274 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 NR1I3Q14994 352 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 DCAF10Q5QP82 559 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 ZDHHC20Q5W0Z9 365 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 SPOCD1Q6ZMY3 1216 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 GLT6D1Q7Z4J2 308 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 MRGPREQ86SM8 312 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 HOOK3Q86VS8 718 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 TICAM1Q8IUC6 712 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 GPR135Q8IZ08 494 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 IPMKQ8NFU5 416 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 OR2L2Q8NH16 312 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 ZFPM2Q8WW38 1151 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 INPP5DQ92835 1189 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 TADA1Q96BN2 335 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 MOCOSQ96EN8 888 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 DCUN1D1Q96GG9 259 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 RBM41Q96IZ5 413 aaKnown RBP12.65□□□□□ -0.38
COPB1-209ENST00000533096 TEKT5Q96M29 485 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 FAM96AQ9H5X1 160 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 XKR8Q9H6D3 395 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 ZNF552Q9H707 407 aaPredicted RBP12.65□□□□□ -0.38
COPB1-209ENST00000533096 AGPAT4Q9NRZ5 378 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 IRAK4Q9NWZ3 460 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 IL17CQ9P0M4 197 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 FAM153AQ9UHL3 310 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 PADI2Q9Y2J8 665 aa12.65□□□□□ -0.38
COPB1-209ENST00000533096 UNC79Q9P2D8 2635 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 A0A1B0GTH6 734 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 KLF7O75840 302 aaPredicted RBP12.64□□□□□ -0.39
COPB1-209ENST00000533096 H2AFZP0C0S5 128 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 NFKB1P19838 968 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 PTPN3P26045 913 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 NDUFS1P28331 727 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 FOLR3P41439 243 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 ITGA9Q13797 1035 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 HIF1AQ16665 826 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 ZNF789Q5FWF6 425 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 CDHR3Q6ZTQ4 885 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 H2AFVQ71UI9 128 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 PID1Q7Z2X4 250 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 CUZD1Q86UP6 607 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 TMEM151BQ8IW70 566 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 DDHD1Q8NEL9 900 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 TM9SF4Q92544 642 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 RMDN2Q96LZ7 410 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 TRAPPC9Q96Q05 1148 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 PACSIN1Q9BY11 444 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
COPB1-209ENST00000533096 TRABDQ9H4I3 376 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 ASB8Q9H765 288 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 SYTL2Q9HCH5 934 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 ATP13A2Q9NQ11 1180 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 P4HTMQ9NXG6 502 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
COPB1-209ENST00000533096 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 IFT80Q9P2H3 777 aaPredicted RBP12.64□□□□□ -0.39
COPB1-209ENST00000533096 POMT2Q9UKY4 750 aa12.64□□□□□ -0.39
COPB1-209ENST00000533096 LOC285095A0A1B0GVY8 99 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 BTN3A1O00481 513 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
COPB1-209ENST00000533096 OR2B3O76000 313 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 AGTP01019 485 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 HBQ1P09105 142 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 ALAS2P22557 587 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 ITGA3P26006 1051 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 CD68P34810 354 aaPredicted RBP12.63□□□□□ -0.39
COPB1-209ENST00000533096 TMPRSS15P98073 1019 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 KDELC1Q6UW63 502 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 KCNMB4Q86W47 210 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 SLC34A3Q8N130 599 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 CARFQ8N187 725 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 ACVR1CQ8NER5 493 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 DNAJB14Q8TBM8 379 aa12.63□□□□□ -0.39
COPB1-209ENST00000533096 TFB1MQ8WVM0 346 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms