RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 KLF2Q9Y5W3 355 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-223ENST00000533079 USP27XA6NNY8 438 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 E7EQ34 232 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 F5H423 210 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-223ENST00000533079 STSP08842 583 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 TNNT1P13805 278 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 OTX2P32243 289 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 GLRBP48167 497 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 KPNA2P52292 529 aaKnown RBP12.09□□□□□ -0.47
CAPN1-223ENST00000533079 PRKAA1Q13131 559 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 LLGL1Q15334 1064 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 B3GNTL1Q67FW5 361 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-223ENST00000533079 HGSNATQ68CP4 663 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 SP5Q6BEB4 398 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-223ENST00000533079 FCRL6Q6DN72 434 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 CUZD1Q86UP6 607 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 KCNMB4Q86W47 210 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 GDAP1Q8TB36 358 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 NACC2Q96BF6 587 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 SERTAD3Q9UJW9 196 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 POMT2Q9UKY4 750 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 SHOC2Q9UQ13 582 aa12.09□□□□□ -0.47
CAPN1-223ENST00000533079 BZW2Q9Y6E2 419 aaKnown RBP12.09□□□□□ -0.47
CAPN1-223ENST00000533079 PCM1Q15154 2024 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 SOWAHDA6NJG2 315 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 TMEM150CB9EJG8 249 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 ZG16O60844 167 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 KLF7O75840 302 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 LCA5LO95447 670 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 SLC4A1P02730 911 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 PYGMP11217 842 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 HLA-DPA1P20036 260 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 CDH3P22223 829 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 NDUFS1P28331 727 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 CYLC1P35663 651 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 FOLR3P41439 243 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 TSFMP43897 325 aaKnown RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 ETF1P62495 437 aaKnown RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 ART3Q13508 389 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 DPYSL3Q14195 570 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 HADHQ16836 314 aaKnown RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 ATP13A5Q4VNC0 1218 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 LDLRAP1Q5SW96 308 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 TXNRD3NBQ6F5E7 133 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 TTC30BQ8N4P2 665 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 DDHD1Q8NEL9 900 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 OR1L3Q8NH93 324 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 CHP1Q99653 195 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 COPG2Q9UBF2 871 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 IP6K2Q9UHH9 426 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 SLC24A2Q9UI40 661 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 TMPRSS11EQ9UL52 423 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 PSMD13Q9UNM6 376 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 NOVA2Q9UNW9 492 aaKnown RBP12.08□□□□□ -0.48
CAPN1-223ENST00000533079 OSGIN2Q9Y236 505 aa12.08□□□□□ -0.48
CAPN1-223ENST00000533079 AKAP9Q99996 3911 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 OR6C74A6NCV1 312 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 SLC9B1P1A6NJY1 282 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 SLC35G4P0C7Q5 338 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 HMGCLP35914 325 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 PRKCIP41743 596 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 PREPP48147 710 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 ARCN1P48444 511 aaKnown RBP12.07□□□□□ -0.48
CAPN1-223ENST00000533079 AIMP2Q13155 320 aaKnown RBP12.07□□□□□ -0.48
CAPN1-223ENST00000533079 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 ASTE1Q2TB18 679 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-223ENST00000533079 PTCHD3Q3KNS1 767 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 PRAMEF17Q5VTA0 474 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 NUP210LQ5VU65 1888 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 METRNLQ641Q3 311 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 PROKR1Q8TCW9 393 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
CAPN1-223ENST00000533079 LURAP1Q96LR2 239 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 PITPNM3Q9BZ71 974 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 ISCUQ9H1K1 167 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 TRABDQ9H4I3 376 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 HAUS4Q9H6D7 363 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 NHEJ1Q9H9Q4 299 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-223ENST00000533079 MYO1AQ9UBC5 1043 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 GPN3Q9UHW5 284 aaPredicted RBP12.07□□□□□ -0.48
CAPN1-223ENST00000533079 ACSL5Q9ULC5 683 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 HEBP2Q9Y5Z4 205 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 COLEC10Q9Y6Z7 277 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 NF1P21359 2839 aa12.07□□□□□ -0.48
CAPN1-223ENST00000533079 LRRC53A6NM62 1247 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 POP7O75817 140 aaKnown RBP12.06□□□□□ -0.48
CAPN1-223ENST00000533079 SERPING1P05155 500 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 CD48P09326 243 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 PIRTP0C851 137 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 ARSEP51690 589 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 PPIDQ08752 370 aaKnown RBP12.06□□□□□ -0.48
CAPN1-223ENST00000533079 ITGA9Q13797 1035 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 NFE2L1Q14494 772 aa12.06□□□□□ -0.48
CAPN1-223ENST00000533079 PDK2Q15119 407 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms