RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 HEXDCQ8WVB3 486 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 LINC00615Q96LM1 132 aaPredicted RBP17.36■□□□□ 0.37
PCF11-206ENST00000533018 RMDN2Q96LZ7 410 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 TUBB2BQ9BVA1 445 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 ACTL8Q9H568 366 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 MAN2B2Q9Y2E5 1009 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 HEBP2Q9Y5Z4 205 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 PIKFYVEQ9Y2I7 2098 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 PTPN13Q12923 2485 aa17.36■□□□□ 0.37
PCF11-206ENST00000533018 DDX3YO15523 660 aaKnown RBP17.35■□□□□ 0.37
PCF11-206ENST00000533018 CPNE3O75131 537 aaKnown RBP17.35■□□□□ 0.37
PCF11-206ENST00000533018 NR1D1P20393 614 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 CDH3P22223 829 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 NDUFS1P28331 727 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 ZNF75DP51815 510 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 KPNA2P52292 529 aaKnown RBP17.35■□□□□ 0.37
PCF11-206ENST00000533018 ZNF140P52738 457 aaPredicted RBP17.35■□□□□ 0.37
PCF11-206ENST00000533018 IGFBP7Q16270 282 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 ZNF449Q6P9G9 518 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 KIAA1328Q86T90 577 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 TEX19Q8NA77 164 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 HM13Q8TCT9 377 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 LCN9Q8WX39 176 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 ALG3Q92685 438 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 MR1Q95460 341 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 RUFY1Q96T51 708 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 SRMSQ9H3Y6 488 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 VPS37BQ9H9H4 285 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 AKIRIN1Q9H9L7 192 aaPredicted RBP17.35■□□□□ 0.37
PCF11-206ENST00000533018 FANCEQ9HB96 536 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 KCND1Q9NSA2 647 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 FEZ2Q9UHY8 353 aaPredicted RBP17.35■□□□□ 0.37
PCF11-206ENST00000533018 PCDHGA6Q9Y5G7 932 aa17.35■□□□□ 0.37
PCF11-206ENST00000533018 IFRD1O00458 451 aaPredicted RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 SGTAO43765 313 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 RFPL1O75677 317 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 ZNF189O75820 626 aaPredicted RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 TPH1P17752 444 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 PRLHRP49683 370 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 RPS18P62269 152 aaKnown RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 KLRB1Q12918 225 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 MSLNQ13421 630 aaPredicted RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 CAPRIN2Q6IMN6 1127 aaKnown RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 DENND5AQ6IQ26 1287 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 PEX26Q7Z412 305 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 FAM71DQ8N9W8 422 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 ACRBPQ8NEB7 543 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 ACVR1CQ8NER5 493 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 DNAJC1Q96KC8 554 aaKnown RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 PPM1MQ96MI6 270 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 ALS2CR12Q96Q35 445 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 SPENQ96T58 3664 aaKnown RBP17.34■□□□□ 0.37
PCF11-206ENST00000533018 TLR10Q9BXR5 811 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 GPR87Q9BY21 358 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 LACRTQ9GZZ8 138 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 ZDHHC3Q9NYG2 299 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 AMFRQ9UKV5 643 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 MAST4O15021 2626 aa17.34■□□□□ 0.37
PCF11-206ENST00000533018 DOPEY2Q9Y3R5 2298 aa17.33■□□□□ 0.37
PCF11-206ENST00000533018 C17orf113A0A1B0GUU1 675 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 GRID2IPA4D2P6 1211 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 SLC9B1P1A6NJY1 282 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 AGAP14A8MT82 685 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 BTNL10A8MVZ5 291 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 MAP3K7O43318 606 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 LDB2O43679 373 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 KLK3P07288 261 aaPredicted RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 PTPN4P29074 926 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 CDKN1CP49918 316 aaPredicted RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 POU6F1Q14863 301 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 PARP6Q2NL67 630 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 GPR33Q49SQ1 333 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 RAD9BQ6WBX8 426 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 ASB18Q6ZVZ8 466 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 SERPINA9Q86WD7 417 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 TAB3Q8N5C8 712 aaPredicted RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 UBL4BQ8N7F7 174 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 TTC13Q8NBP0 860 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 PHC3Q8NDX5 983 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 OR8K5Q8NH50 307 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 SEC14L1Q92503 715 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 ZNF501Q96CX3 271 aaPredicted RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 CLIP3Q96DZ5 547 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 COG4Q9H9E3 785 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 PIH1D1Q9NWS0 290 aaKnown RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 TLK1Q9UKI8 766 aa17.33■□□□□ 0.36
PCF11-206ENST00000533018 PACSIN2Q9UNF0 486 aaPredicted RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 FARSAQ9Y285 508 aaKnown RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 REXO2Q9Y3B8 237 aaKnown RBP17.33■□□□□ 0.36
PCF11-206ENST00000533018 K7EM74 188 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 RECKO95980 971 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 ACRV1P26436 265 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 VAV2P52735 878 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 PMS2P54278 862 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 TCTN3Q6NUS6 607 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 CARFQ8N187 725 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 LRRC57Q8N9N7 239 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 MRFAP1L1Q96HT8 127 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 SLC7A5P2Q9GIP4 190 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 LRRC40Q9H9A6 602 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms