RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 USP9YO00507 2555 aaPredicted RBP16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 C5orf60A6NFR6 353 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ARGFXA6NJG6 315 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 SLC9B1P1A6NJY1 282 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 AGAP14A8MT82 685 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 LCA5LO95447 670 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 PRLHRP49683 370 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ZNF140P52738 457 aaPredicted RBP16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 PDE1BQ01064 536 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ANKRD20A2Q5SQ80 823 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ANKRD20A1Q5TYW2 823 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 FAM69BQ5VUD6 431 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ANKRD20A3Q5VUR7 823 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ZNF517Q6ZMY9 492 aaPredicted RBP16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 NXPE1Q8N323 547 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 FAM26EQ8N5C1 309 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 CCDC110Q8TBZ0 833 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 HM13Q8TCT9 377 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 ZFPM2Q8WW38 1151 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 THAP4Q8WY91 577 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 DCUN1D1Q96GG9 259 aa16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPUSD4-207ENST00000532800 KLHL33A6NCF5 533 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 KCNN4O15554 427 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 PJA2O43164 708 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 PTMSP20962 102 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 CDH3P22223 829 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 CTNNA1P35221 906 aaKnown RBP16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 PTGIRP43119 386 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 UQCRFS1P47985 274 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 CDKN1CP49918 316 aaPredicted RBP16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 EIF3EP60228 445 aaKnown RBP16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 SPARCL1Q14515 664 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 KRT33BQ14525 404 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 TMTC4Q5T4D3 741 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 DENND5AQ6IQ26 1287 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 AADACL2Q6P093 401 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 ATCAYQ86WG3 371 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 CDKL3Q8IVW4 592 aaPredicted RBP16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 CARFQ8N187 725 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 SEC14L1Q92503 715 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 LATS2Q9NRM7 1088 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 AAR2Q9Y312 384 aaKnown RBP16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 COLEC10Q9Y6Z7 277 aa16.61■□□□□ 0.25
RPUSD4-207ENST00000532800 GSAPA4D1B5 854 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 CRTAMO95727 393 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 PRSS56P0CW18 603 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 RBP3P10745 1247 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 RALBP11234 206 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ATP1B2P14415 290 aaPredicted RBP16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ITGALP20701 1170 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 NDUFS1P28331 727 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 CCL11P51671 97 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 COPS2P61201 443 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 PRKAA1Q13131 559 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 NADK2Q4G0N4 442 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ZNF658BQ4V348 819 aaPredicted RBP16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ZNF789Q5FWF6 425 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 PLEKHS1Q5SXH7 462 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 IZUMO3Q5VZ72 239 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 DSELQ8IZU8 1212 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ENDOVQ8N8Q3 282 aaKnown RBP16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ACVR1CQ8NER5 493 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 OR8K5Q8NH50 307 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 OR1L3Q8NH93 324 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ADAMTS17Q8TE56 1095 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ULK4Q96C45 1275 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 DNAJC1Q96KC8 554 aaKnown RBP16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 SPATA13Q96N96 652 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 FERD3LQ96RJ6 166 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 COPS8Q99627 209 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 TBL1YQ9BQ87 522 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 CCM2Q9BSQ5 444 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 SLC25A23Q9BV35 468 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 OSBPL8Q9BZF1 889 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 KLHL25Q9H0H3 589 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ING2Q9H160 280 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 COG4Q9H9E3 785 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 ACSS2Q9NR19 701 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 C1GALT1Q9NS00 363 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 HEBP2Q9Y5Z4 205 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 PCSK5Q92824 1860 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 NBPF19A0A087WUL8 3843 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 PIKFYVEQ9Y2I7 2098 aa16.6■□□□□ 0.25
RPUSD4-207ENST00000532800 CCDC66A2RUB6 948 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 BLACEA4D250 179 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 TMEM150CB9EJG8 249 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 MEN1O00255 615 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 BTN3A3O00478 584 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 BTN3A1O00481 513 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 LDB2O43679 373 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 KLK3P07288 261 aaPredicted RBP16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PYGMP11217 842 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 GP1BBP13224 206 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PVRP15151 417 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 ST6GAL1P15907 406 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 PDHA2P29803 388 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 MC4RP32245 332 aa16.59■□□□□ 0.25
RPUSD4-207ENST00000532800 RORAP35398 523 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms