RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SYT16Q17RD7 645 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PLA2G4EQ3MJ16 856 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM173Q86WV6 379 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MFSD2AQ8NA29 543 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 OR10T2Q8NGX3 314 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 FBXO30Q8TB52 745 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MYDGFQ969H8 173 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 LGALS12Q96DT0 336 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC45A3Q96JT2 553 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RBM4BQ9BQ04 359 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RBM4Q9BWF3 364 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 C1QTNF1Q9BXJ1 281 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RACGAP1Q9H0H5 632 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RSPH9Q9H1X1 276 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TTYH1Q9H313 450 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RERGLQ9H628 205 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 POLE3Q9NRF9 147 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SPG21Q9NZD8 308 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHGA8Q9Y5G5 932 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MBLAC1A4D2B0 266 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CDK2AP1O14519 115 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ZBTB14O43829 449 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CFHP08603 1231 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 BMP4P12644 408 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MYL9P24844 172 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MGAT1P26572 445 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TKTL1P51854 596 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 GHRHRQ02643 423 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MVKQ03426 396 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 NPTX1Q15818 432 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SWI5Q1ZZU3 235 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 USP41Q3LFD5 358 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PPM1JQ5JR12 505 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 PPP1R26Q5T8A7 1209 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CACHD1Q5VU97 1274 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 LINC00299Q6ZSB3 139 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CLYBLQ8N0X4 340 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 UBE2J2Q8N2K1 259 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 OR13F1Q8NGS4 319 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 LILRB1Q8NHL6 650 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RDH11Q8TC12 318 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 BRSK1Q8TDC3 778 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TMC2Q8TDI7 906 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ASIC4Q96FT7 647 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 KREMEN1Q96MU8 473 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF285Q96NJ3 590 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TRNT1Q96Q11 434 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 MED28Q9H204 178 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 SYTL2Q9HCH5 934 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ZBTB26Q9HCK0 441 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM161AQ9NX61 479 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 GLTPQ9NZD2 209 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 IL37Q9NZH6 218 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 CD274Q9NZQ7 290 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 NOCTQ9UK39 431 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 ANKRD6Q9Y2G4 727 aa6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 RP1L1Q8IWN7 2480 aaPredicted RBP6.7□□□□□ -1.34
TGFBR3-209ENST00000532540 H3BQ06 376 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 HAS3O00219 553 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PLOD2O00469 737 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TSPAN3O60637 253 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 DHFRP00374 187 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RPLP0P05388 317 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ERVK-10P10266 1014 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 GPR15P49685 360 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RPL7AP62424 266 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 GAD2Q05329 585 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 KYAT1Q16773 422 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ZC3H12BQ5HYM0 836 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 C6orf141Q5SZD1 244 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 STXBP5Q5T5C0 1151 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ARHGAP17Q68EM7 881 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF470Q6ECI4 717 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PNCKQ6P2M8 343 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CNKSR3Q6P9H4 555 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF438Q7Z4V0 828 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM102Q8N9M5 508 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 ROPN1LQ96C74 230 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 METTL2AQ96IZ6 378 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TWNKQ96RR1 684 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TTPALQ9BTX7 342 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM83DQ9H4H8 585 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 KLHL31Q9H511 634 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CLDND1Q9NY35 253 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM8A1Q9UBU6 413 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 VPS28Q9UK41 221 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 USP18Q9UMW8 372 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 LAMA4Q16363 1823 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 IGKV6-21A0A0C4DH24 114 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 TMX2-CTNND1H3BSU7 103 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 SSX5O60225 188 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RFPL1O75677 317 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 RASAL1O95294 804 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 PROS1P07225 676 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 FGF3P11487 239 aaPredicted RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CFL1P23528 166 aaKnown RBP6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 GPM6BQ13491 265 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 MEP1AQ16819 746 aa6.69□□□□□ -1.34
TGFBR3-209ENST00000532540 CCDC157Q569K6 752 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms