RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 ELMO1Q92556 727 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 RSC1A1Q92681 617 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 NXPE2Q96DL1 559 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 SLC46A1Q96NT5 459 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 DPYSL5Q9BPU6 564 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 TWSG1Q9GZX9 223 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 EPB41L1Q9H4G0 881 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 VPS37BQ9H9H4 285 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 IMP3Q9NV31 184 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 WHRNQ9P202 907 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 EPHA6Q9UF33 1036 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 SLC24A2Q9UI40 661 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 MRFAP1Q9Y605 127 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 MN1Q10571 1320 aaPredicted RBP13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 EPG5Q9HCE0 2579 aa13.6□□□□□ -0.23
TSPAN4-220ENST00000532375 CDRT15L2A8MXV6 281 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 TLX3O43711 291 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 DUX1O43812 170 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 UBXN7O94888 489 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 SLC35G4P0C7Q5 338 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 HGFP14210 728 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 TYRP1P17643 537 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 PAMP19021 973 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 GABRB3P28472 473 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 ETV5P41161 510 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 ELK3P41970 407 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 GFERP55789 205 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 GABREP78334 506 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 CTBP1Q13363 440 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 TRA2AQ13595 282 aaKnown RBP eCLIP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 BOP1Q14137 746 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 GBX1Q14549 363 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 FASTKD3Q14CZ7 662 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 BRD3Q15059 726 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 LONRF1Q17RB8 773 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 WHAMMP3Q1A5X7 153 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 MAP9Q49MG5 647 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 HSP90AA5PQ58FG0 334 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 C3orf38Q5JPI3 329 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 HP1BP3Q5SSJ5 553 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 ZNF549Q6P9A3 640 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 UNC5AQ6ZN44 842 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 RAB11FIP2Q7L804 512 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 SDCCAG8Q86SQ7 713 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 PDZD3Q86UT5 571 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 SLC22A15Q8IZD6 547 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 PDIK1LQ8N165 341 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 RCBTB1Q8NDN9 531 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 PHC3Q8NDX5 983 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 JPH3Q8WXH2 748 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 TFGQ92734 400 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 LRRC39Q96DD0 335 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 CCDC74BQ96LY2 380 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 NAT9Q9BTE0 207 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 RAB33BQ9H082 229 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 DPH5Q9H2P9 285 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 KIR3DX1Q9H7L2 352 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 LATS2Q9NRM7 1088 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 CRYL1Q9Y2S2 319 aa13.59□□□□□ -0.23
TSPAN4-220ENST00000532375 PLD2O14939 933 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 HGSO14964 777 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 NIPSNAP2O75323 286 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 TTC4O95801 387 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 FMO4P31512 558 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 SLC1A2P43004 574 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 CAPZBP47756 277 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 PPP1CAP62136 330 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 PLOD1Q02809 727 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 EIF3IQ13347 325 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 HIF1AQ16665 826 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 DNAJC21Q5F1R6 531 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 SPANXN3Q5MJ09 141 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 ZNF470Q6ECI4 717 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 TRMT10BQ6PF06 316 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 ZDHHC24Q6UX98 284 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 CNTN4Q8IWV2 1026 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 LMNTD2Q8IXW0 634 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 FBXO39Q8N4B4 442 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 BMPERQ8N8U9 685 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 ZCCHC14Q8WYQ9 949 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 SEC14L1Q92503 715 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 AHCYL2Q96HN2 611 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 LRRC1Q9BTT6 524 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 STRADBQ9C0K7 418 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 C20orf96Q9NUD7 363 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 INTS10Q9NVR2 710 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 ZMIZ1Q9ULJ6 1067 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 CHMP2BQ9UQN3 213 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 AK5Q9Y6K8 562 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 AHCTF1Q8WYP5 2266 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 CACNA1BQ00975 2339 aa13.58□□□□□ -0.24
TSPAN4-220ENST00000532375 ZFHX4Q86UP3 3567 aa13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 UBA6A0AVT1 1052 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
TSPAN4-220ENST00000532375 KIF1CO43896 1103 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms