RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 GPR68Q15743 365 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 ALFQ53S48 1182 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 NAA35Q5VZE5 725 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 GSTA5Q7RTV2 222 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 CCDC190Q86UF4 302 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 TEX19Q8NA77 164 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 TBATAQ96M53 351 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 RCC2Q9P258 522 aaKnown RBP3.6□□□□□ -1.83
PTPRK-220ENST00000531466 CLIP2Q9UDT6 1046 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 CNOT8Q9UFF9 292 aaKnown RBP3.6□□□□□ -1.83
PTPRK-220ENST00000531466 ISY1Q9ULR0 285 aaKnown RBP3.6□□□□□ -1.83
PTPRK-220ENST00000531466 GPR52Q9Y2T5 361 aa3.6□□□□□ -1.83
PTPRK-220ENST00000531466 TMEM184BQ9Y519 407 aaPredicted RBP3.6□□□□□ -1.83
PTPRK-220ENST00000531466 CENPJQ9HC77 1338 aaPredicted RBP3.6□□□□□ -1.83
PTPRK-220ENST00000531466 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 A0A1W2PPR1 153 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 OR2M5A3KFT3 312 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 KHDRBS3O75525 346 aaKnown RBP3.59□□□□□ -1.83
PTPRK-220ENST00000531466 ITIH1P19827 911 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 RBMS1P29558 406 aaKnown RBP3.59□□□□□ -1.83
PTPRK-220ENST00000531466 PRKAA1Q13131 559 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 HLA-BQ31612 363 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 KLHL10Q6JEL2 608 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 LCA5Q86VQ0 697 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 HACE1Q8IYU2 909 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 LSMEM2Q8N112 164 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 L3MBTL4Q8NA19 623 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 PRSS33Q8NF86 280 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 OR4C3Q8NH37 302 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 RSPH1Q8WYR4 309 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 GTF3AQ92664 365 aaKnown RBP3.59□□□□□ -1.83
PTPRK-220ENST00000531466 EGLN2Q96KS0 407 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 FUCA2Q9BTY2 467 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 RPP25Q9BUL9 199 aaKnown RBP3.59□□□□□ -1.83
PTPRK-220ENST00000531466 DGCR6LQ9BY27 220 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 TMEM39BQ9GZU3 492 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 CHST11Q9NPF2 352 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 MIOSQ9NXC5 875 aa3.59□□□□□ -1.83
PTPRK-220ENST00000531466 IGKV6D-21A0A0A0MT36 114 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 EIF3CLB5ME19 914 aaKnown RBP3.58□□□□□ -1.84
PTPRK-220ENST00000531466 ATP6V0E1O15342 81 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 TNFSF14O43557 240 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 HNRNPA1P09651 372 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTPRK-220ENST00000531466 CASQ1P31415 396 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 F2RL1P55085 397 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 RPS18P62269 152 aaKnown RBP3.58□□□□□ -1.84
PTPRK-220ENST00000531466 LGALS3BPQ08380 585 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 NFATC2Q13469 925 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 KCNC3Q14003 757 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 CCDC70Q6NSX1 233 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 CYP26C1Q6V0L0 522 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 CCDC73Q6ZRK6 1079 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 KRT77Q7Z794 578 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 TTC30BQ8N4P2 665 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 IL17REQ8NFR9 667 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 CCDC47Q96A33 483 aaKnown RBP3.58□□□□□ -1.84
PTPRK-220ENST00000531466 NSL1Q96IY1 281 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 GFI1Q99684 422 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 YY1AP1Q9H869 796 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 FBXO2Q9UK22 296 aaPredicted RBP3.58□□□□□ -1.84
PTPRK-220ENST00000531466 CELA1Q9UNI1 258 aa3.58□□□□□ -1.84
PTPRK-220ENST00000531466 LRRFIP2Q9Y608 721 aaKnown RBP3.58□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF217O75362 1048 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 TPM2P07951 284 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 NEFHP12036 1026 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 DCAF10Q5QP82 559 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 WLSQ5T9L3 541 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 CORO6Q6QEF8 472 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 HSCBQ8IWL3 235 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 CHCHD4Q8N4Q1 142 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 POM121L12Q8N7R1 296 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 OLIG1Q8TAK6 271 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 FAM210AQ96ND0 272 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 USP28Q96RU2 1077 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 PANK3Q9H999 370 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 CWC15Q9P013 229 aaKnown RBP3.57□□□□□ -1.84
PTPRK-220ENST00000531466 THEGQ9P2T0 379 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 MUTYHQ9UIF7 546 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 EXO1Q9UQ84 846 aaKnown RBP3.57□□□□□ -1.84
PTPRK-220ENST00000531466 WDR37Q9Y2I8 494 aa3.57□□□□□ -1.84
PTPRK-220ENST00000531466 H3BQ06 376 aaPredicted RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 TMEM189-UBE2V1I3L0A0 370 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 ZNF195O14628 629 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 MAP2K7O14733 419 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 C22orf31O95567 290 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 SELLP14151 372 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 MMP12P39900 470 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 PIK3CAP42336 1068 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 TDO2P48775 406 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 MRPS34P82930 218 aaKnown RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 HMGN5P82970 282 aaKnown RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 PAX8Q06710 450 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 UBE2V1Q13404 147 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 PRICKLE4Q2TBC4 344 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 ALDH1L2Q3SY69 923 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 FAM133BQ5BKY9 247 aaKnown RBP3.56□□□□□ -1.84
PTPRK-220ENST00000531466 FAM69AQ5T7M9 428 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 Q6ZRP5 223 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 MMS22LQ6ZRQ5 1243 aa3.56□□□□□ -1.84
PTPRK-220ENST00000531466 PIGZQ86VD9 579 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms