RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CYP1A1P04798 512 aaPredicted RBP7.98□□□□□ -1.13
CD44-232ENST00000531118 ERCC2P18074 760 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 KPNA2P52292 529 aaKnown RBP7.98□□□□□ -1.13
CD44-232ENST00000531118 SMSP52788 366 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 FOXL2P58012 376 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 TYRO3Q06418 890 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 ADCY2Q08462 1091 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 FOXD4Q12950 439 aaPredicted RBP7.98□□□□□ -1.13
CD44-232ENST00000531118 CA9Q16790 459 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 AGAP7PQ5VUJ5 663 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 PRAMEF13Q5VWM6 474 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 ISM2Q6H9L7 571 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 MEX3BQ6ZN04 569 aaKnown RBP7.98□□□□□ -1.13
CD44-232ENST00000531118 RFX8Q6ZV50 586 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 B4GALNT4Q76KP1 1039 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 BTLAQ7Z6A9 289 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 ADGRG6Q86SQ4 1221 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 ZNF547Q8IVP9 402 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 NDUFAF2Q8N183 169 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 CARFQ8N187 725 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 OR2Y1Q8NGV0 311 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 SLC20A1Q8WUM9 679 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 AGAP4Q96P64 663 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 TAAR6Q96RI8 345 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 MDFIQ99750 246 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 TREX2Q9BQ50 279 aaPredicted RBP7.98□□□□□ -1.13
CD44-232ENST00000531118 SELENOOQ9BVL4 669 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 SLC7A5P2Q9GIP4 190 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 ENKD1Q9H0I2 346 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 PKD2L2Q9NZM6 624 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 TRIM10Q9UDY6 481 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 FBXL4Q9UKA2 621 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 MAN1B1Q9UKM7 699 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 WDR37Q9Y2I8 494 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 FHOD1Q9Y613 1164 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 ATRQ13535 2644 aa7.98□□□□□ -1.13
CD44-232ENST00000531118 GTF3C1Q12789 2109 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 C1orf232A0A0U1RR37 186 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 CCDC66A2RUB6 948 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 AGPSO00116 658 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 VEGFDO43915 354 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 UMODP07911 640 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 CBSLP0DN79 551 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 KRT3P12035 628 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 AGXTP21549 392 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 IDSP22304 550 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 DNAJA1P31689 397 aaKnown RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 CBSP35520 551 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 HALP42357 657 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 MAP2K3P46734 347 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 SPINT3P49223 89 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 EPHB1P54762 984 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 CSNK1G2P78368 415 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 FMO1Q01740 532 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 SRSF11Q05519 484 aaKnown RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 LTBQ06643 244 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 PTP4A2Q12974 167 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 SLC9A5Q14940 896 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 IRAK1BP1Q5VVH5 260 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 ALS2CLQ60I27 953 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 FAAH2Q6GMR7 532 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 WDR59Q6PJI9 974 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 TMEM207Q6UWW9 146 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 TMEM151BQ8IW70 566 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 FMR1NBQ8N0W7 255 aaPredicted RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 BBS5Q8N3I7 341 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 C3orf20Q8ND61 904 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 LYSMD1Q96S90 227 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 FOXC2Q99958 501 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 C17orf62Q9BQA9 187 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 TDRD1Q9BXT4 1180 aaKnown RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 FAM83DQ9H4H8 585 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 DHX35Q9H5Z1 703 aaKnown RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 DTLQ9NZJ0 730 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 GPN3Q9UHW5 284 aaPredicted RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 NOCTQ9UK39 431 aaKnown RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 RPH3AQ9Y2J0 694 aaPredicted RBP7.97□□□□□ -1.13
CD44-232ENST00000531118 NBEAL1Q6ZS30 2694 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 TLN2Q9Y4G6 2542 aa7.97□□□□□ -1.13
CD44-232ENST00000531118 E7EQ34 232 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 ZNF749O43361 778 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 MTX2O75431 263 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 MSL3P1P0C860 447 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 EPB42P16452 691 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 MMP13P45452 471 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 LMAN1P49257 510 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 ZNF143P52747 638 aaPredicted RBP7.96□□□□□ -1.14
CD44-232ENST00000531118 IST1P53990 364 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 CASP6P55212 293 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 RBPJQ06330 500 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 MFAP5Q13361 173 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 RPE65Q16518 533 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 C3AR1Q16581 482 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 LONRF1Q17RB8 773 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 KHDC1Q4VXA5 237 aaKnown RBP7.96□□□□□ -1.14
CD44-232ENST00000531118 MLIPQ5VWP3 458 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 DPY19L2P1Q6NXN4 242 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 CAPN12Q6ZSI9 719 aa7.96□□□□□ -1.14
CD44-232ENST00000531118 C11orf96Q7Z7L8 435 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms