RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PLOD1Q02809 727 aaPredicted RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 MERTKQ12866 999 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 PWP1Q13610 501 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 MYLK3Q32MK0 819 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 PLEKHG6Q3KR16 790 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 KCTD21Q4G0X4 260 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 SLC2A7Q6PXP3 512 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 TRIM46Q7Z4K8 759 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 TNIP2Q8NFZ5 429 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ZBTB18Q99592 522 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ELOVL2Q9NXB9 296 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ASIC5Q9NY37 505 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 TUBA8Q9NY65 449 aaPredicted RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 WWOXQ9NZC7 414 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 PRSS21Q9Y6M0 314 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ZNF821O75541 412 aaPredicted RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 GUCA1CO95843 209 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 CNPP09543 421 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 VARSP26640 1264 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 SNRPD1P62314 119 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 LMAN2Q12907 356 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 RBBP5Q15291 538 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 CHRNA6Q15825 494 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 C18orf21Q32NC0 220 aaPredicted RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 RFTN2Q52LD8 501 aaPredicted RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 FIBCD1Q8N539 461 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 CLDN19Q8N6F1 224 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 TRIML2Q8N7C3 387 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ZFP28Q8NHY6 868 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 FAM110BQ8TC76 370 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 LKAAEAR1Q8TD35 194 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 NSMCE2Q96MF7 247 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 TMEM74Q96NL1 305 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 CGREF1Q99674 301 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ADI1Q9BV57 179 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 KCTD5Q9NXV2 234 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 OAZ3Q9UMX2 235 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 PPIL1Q9Y3C6 166 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ZFC3H1O60293 1989 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 DENND4CQ5VZ89 1909 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 DLGAP1O14490 977 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 ACOX3O15254 700 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 KATNA1O75449 491 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 LDLRP01130 860 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 CKMP06732 381 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 ETS2P15036 469 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 PCSK2P16519 638 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 ITGB6P18564 788 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 GABRR2P28476 465 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 SLC36A3Q495N2 470 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.9■□□□□ 0.3
BRCA2-204ENST00000530893 ZDHHC20Q5W0Z9 365 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 TPRG1Q6ZUI0 275 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 FAM47BQ8NA70 645 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 BHMTQ93088 406 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 CCDC97Q96F63 343 aaPredicted RBP16.9■□□□□ 0.3
BRCA2-204ENST00000530893 SCRN2Q96FV2 425 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 BDH2Q9BUT1 245 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 APOL5Q9BWW9 433 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 TRIM8Q9BZR9 551 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 RPF2Q9H7B2 306 aaKnown RBP16.9■□□□□ 0.3
BRCA2-204ENST00000530893 CAAP1Q9H8G2 361 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 RC3H2Q9HBD1 1191 aaKnown RBP16.9■□□□□ 0.3
BRCA2-204ENST00000530893 SMOXQ9NWM0 555 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 AP3M1Q9Y2T2 418 aa16.9■□□□□ 0.3
BRCA2-204ENST00000530893 POLR3HQ9Y535 204 aaPredicted RBP16.9■□□□□ 0.3
BRCA2-204ENST00000530893 FAM149AA5PLN7 773 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 TPST1O60507 370 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ULK1O75385 1050 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 KCNH1O95259 989 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 CDH1P12830 882 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 EPB42P16452 691 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 PFKLP17858 780 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 UGT1A6P19224 532 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 UGT1A1P22309 533 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 UGT1A4P22310 534 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 HRH2P25021 359 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 UGT1A3P35503 534 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 UGT1A5P35504 534 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 KIAA0040Q15053 153 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 PHKG1Q16816 387 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 GLYATQ6IB77 296 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ISLR2Q6UXK2 745 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 SLC39A5Q6ZMH5 540 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 LEMD2Q8NC56 503 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 DIS3LQ8TF46 1054 aaKnown RBP16.89■□□□□ 0.29
BRCA2-204ENST00000530893 BIRC7Q96CA5 298 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 NMD3Q96D46 503 aaKnown RBP16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 CCDC115Q96NT0 180 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 DEFB118Q96PH6 123 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ZDHHC3Q9NYG2 299 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 CFAP97Q9P2B7 532 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ZNF639Q9UID6 485 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ZMYM5Q9UJ78 669 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 MYOCOSA0A1B0GUC4 107 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 ABHD14A-ACY1A0A1B0GW23 586 aa16.89■□□□□ 0.29
BRCA2-204ENST00000530893 TEX28O15482 410 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms