RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SOHLH2Q9NX45 425 aa20.37■□□□□ 0.85
SMPD1-204ENST00000530395 AMFRQ9UKV5 643 aa20.37■□□□□ 0.85
SMPD1-204ENST00000530395 REXO2Q9Y3B8 237 aaKnown RBP20.37■□□□□ 0.85
SMPD1-204ENST00000530395 PTPN13Q12923 2485 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 PIKFYVEQ9Y2I7 2098 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 C17orf113A0A1B0GUU1 675 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 PIPSLA2A3N6 862 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 GRID2IPA4D2P6 1211 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 MKRN2OSH3BPM6 223 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 MATN2O00339 956 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 ARHGAP6O43182 974 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 SGTAO43765 313 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 CPNE3O75131 537 aaKnown RBP20.36■□□□□ 0.85
SMPD1-204ENST00000530395 CASRP41180 1078 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 MSLNQ13421 630 aaPredicted RBP20.36■□□□□ 0.85
SMPD1-204ENST00000530395 PARP6Q2NL67 630 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 DENND5AQ6IQ26 1287 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 ZNF449Q6P9G9 518 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 RAD9BQ6WBX8 426 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 CERS6Q6ZMG9 384 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 PEX26Q7Z412 305 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 SYCE1Q8N0S2 351 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 TXLNBQ8N3L3 684 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 ACRBPQ8NEB7 543 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 ACVR1CQ8NER5 493 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 OR8K5Q8NH50 307 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 LACRTQ9GZZ8 138 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 LRRC40Q9H9A6 602 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 FANCEQ9HB96 536 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 ZDHHC3Q9NYG2 299 aa20.36■□□□□ 0.85
SMPD1-204ENST00000530395 IFRD1O00458 451 aaPredicted RBP20.35■□□□□ 0.85
SMPD1-204ENST00000530395 LDB2O43679 373 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 SCRG1O75711 98 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 NTRK1P04629 796 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 P3H1Q32P28 736 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 ZRANB3Q5FWF4 1079 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 TMEM126BQ8IUX1 230 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 KLHDC8BQ8IXV7 354 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 DNAJC1Q96KC8 554 aaKnown RBP20.35■□□□□ 0.85
SMPD1-204ENST00000530395 GPR87Q9BY21 358 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 ACTL8Q9H568 366 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 COG4Q9H9E3 785 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 MAN2B2Q9Y2E5 1009 aa20.35■□□□□ 0.85
SMPD1-204ENST00000530395 SPENQ96T58 3664 aaKnown RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 MIF4GDA9UHW6 222 aaKnown RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 CCL22O00626 93 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 RFPL1O75677 317 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 FURINP09958 794 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 POLR2CP19387 275 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 CDH3P22223 829 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 ACRV1P26436 265 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 ARCN1P48444 511 aaKnown RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 KPNA2P52292 529 aaKnown RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 RPS15P62841 145 aaKnown RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 TAS2R42Q7RTR8 314 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 LILRA3Q8N6C8 439 aaPredicted RBP20.34■□□□□ 0.85
SMPD1-204ENST00000530395 FAM71DQ8N9W8 422 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 OR4E2Q8NGC2 313 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 LCN9Q8WX39 176 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 ALS2CR12Q96Q35 445 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 FERD3LQ96RJ6 166 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 SRMSQ9H3Y6 488 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 KCND1Q9NSA2 647 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 POMT2Q9UKY4 750 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 BTRCQ9Y297 605 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 COL12A1Q99715 3063 aa20.34■□□□□ 0.85
SMPD1-204ENST00000530395 NBASA2RRP1 2371 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 IGLV3-16A0A075B6K0 115 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 GSAPA4D1B5 854 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 H7C0S8 307 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 PSMD3O43242 534 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 MAP3K7O43318 606 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 GSTM1P09488 218 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 PMS2P54278 862 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 GSTM4Q03013 218 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 KIF5AQ12840 1032 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 KLRB1Q12918 225 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 GPR19Q15760 415 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 KCTD11Q693B1 232 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 SERPINA9Q86WD7 417 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 ZNF501Q96CX3 271 aaPredicted RBP20.33■□□□□ 0.85
SMPD1-204ENST00000530395 BAG1Q99933 345 aaPredicted RBP20.33■□□□□ 0.85
SMPD1-204ENST00000530395 LATS2Q9NRM7 1088 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 C1GALT1Q9NS00 363 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 NLE1Q9NVX2 485 aaPredicted RBP20.33■□□□□ 0.85
SMPD1-204ENST00000530395 TP53TG5Q9Y2B4 290 aa20.33■□□□□ 0.85
SMPD1-204ENST00000530395 MAST4O15021 2626 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 TRBV5-4A0A0C4DH59 114 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 PTPN4P29074 926 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 CD151P48509 253 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 CACNG1Q06432 222 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 RPA4Q13156 261 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 POU6F1Q14863 301 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 SYVN1Q86TM6 617 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 STYXQ8WUJ0 223 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 MR1Q95460 341 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 OR52A5Q9H2C5 316 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 MVB12BQ9H7P6 319 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 SYTL2Q9HCH5 934 aa20.32■□□□□ 0.84
SMPD1-204ENST00000530395 SLC9B1P1A6NJY1 282 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms