RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 STN1Q9H668 368 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 SUDS3Q9H7L9 328 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 ARNT2Q9HBZ2 717 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 IL26Q9NPH9 171 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 UBP1Q9NZI7 540 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 RSPH14Q9UHP6 348 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 FEZ2Q9UHY8 353 aaPredicted RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 PLEKHM1Q9Y4G2 1056 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 PCDHGA3Q9Y5H0 932 aa6.95□□□□□ -1.3
ITGB1-218ENST00000528877 TLN1Q9Y490 2541 aaKnown RBP6.95□□□□□ -1.3
ITGB1-218ENST00000528877 KIF26BQ2KJY2 2108 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 BSNQ9UPA5 3926 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 GLYATL1P3A0A0U1RQE8 302 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KLHL33A6NCF5 533 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 C5orf60A6NFR6 353 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 AGAP14A8MT82 685 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 B4E171 279 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 K7ENP7 123 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KCNJ13O60928 360 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ASMTLO95671 621 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 WNT11O96014 354 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 RBP3P10745 1247 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PYGMP11217 842 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF7P17097 686 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 XRCC1P18887 633 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PSMB4P28070 264 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ALDH4A1P30038 563 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 SLC5A2P31639 672 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 CETN2P41208 172 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 TSPAN7P41732 249 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ZNF140P52738 457 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 GSDMDP57764 484 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 EIF3EP60228 445 aaKnown RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PDE1BQ01064 536 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 RHDQ02161 417 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 CFHR1Q03591 330 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KIF5AQ12840 1032 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 TAF1AQ15573 450 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ANKRD20A2Q5SQ80 823 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ANKRD20A1Q5TYW2 823 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ANKRD20A3Q5VUR7 823 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KCTD11Q693B1 232 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 INO80CQ6PI98 192 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ABRAXAS1Q6UWZ7 409 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 SEZ6L2Q6UXD5 910 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 CHST15Q7LFX5 561 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PID1Q7Z2X4 250 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KDELC2Q7Z4H8 507 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KIAA1328Q86T90 577 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 SLC9B2Q86UD5 537 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 UBL4BQ8N7F7 174 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 BMPERQ8N8U9 685 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 IPMKQ8NFU5 416 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 OR10G6Q8NH81 332 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 SLC35B2Q8TB61 432 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 BRSK1Q8TDC3 778 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 BBC3Q96PG8 261 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 TSGA10Q9BZW7 698 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 RDH14Q9HBH5 336 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 POT1Q9NUX5 634 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 AKAP7Q9P0M2 348 aaPredicted RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 CPNE7Q9UBL6 633 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PISDQ9UG56 409 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 ZNHIT2Q9UHR6 403 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 KCNK6Q9Y257 313 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 AAR2Q9Y312 384 aaKnown RBP6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PKP3Q9Y446 797 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PRKAB1Q9Y478 270 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 CAPN6Q9Y6Q1 641 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 TENM4Q6N022 2769 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 PIEZO2Q9H5I5 2752 aa6.94□□□□□ -1.3
ITGB1-218ENST00000528877 UNC79Q9P2D8 2635 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 IGLV3-16A0A075B6K0 115 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PRAMEF33A0A0G2JMD5 474 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 MACROD2A1Z1Q3 448 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 GOLGA6L9A6NEM1 432 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 H7C0C1 242 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 TOX3O15405 576 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 KCNN4O15554 427 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 KLK10O43240 276 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PRAMEF10O60809 474 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 CDK14O94921 469 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 MED26O95402 600 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 SLC4A1P02730 911 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 C9P02748 559 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 HGFP14210 728 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 BRAFP15056 766 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 VCLP18206 1134 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ITIH1P19827 911 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 PSMA3P25788 255 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ADMP35318 185 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ETV5P41161 510 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 CAPZBP47756 277 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 ATP5OP48047 213 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 CXADRP78310 365 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
ITGB1-218ENST00000528877 NFATC2Q13469 925 aa6.93□□□□□ -1.3
ITGB1-218ENST00000528877 BIRC2Q13490 618 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms