RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CNSTQ6PJW8 725 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 FRA10AC1Q70Z53 315 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 PDZD3Q86UT5 571 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 GSPT2Q8IYD1 628 aaKnown RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 FBXO15Q8NCQ5 510 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 STAG3L4Q8TBR4 150 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 NETO1Q8TDF5 533 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 SAP25Q8TEE9 199 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 ZDHHC1Q8WTX9 485 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 SLC22A18Q96BI1 424 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CCDC126Q96EE4 140 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 PGM2Q96G03 612 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 SMC6Q96SB8 1091 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 GPR21Q99679 349 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 DHRS4Q9BTZ2 278 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 LRRC61Q9BV99 259 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 BOCQ9BWV1 1114 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 DERL2Q9GZP9 239 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 TMEM168Q9H0V1 697 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 CNOT10Q9H9A5 744 aaKnown RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 SARS2Q9NP81 518 aaKnown RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 TAAR2Q9P1P5 351 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 TMPRSS11EQ9UL52 423 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 ACTL7BQ9Y614 415 aa7.77□□□□□ -1.17
SSBP3-211ENST00000528787 COL5A1P20908 1838 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-211ENST00000528787 ARHGEF17Q96PE2 2063 aaPredicted RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SLC5A10A0PJK1 596 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 TLDC2A0PJX2 215 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 RHPN2P1A8MT19 583 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CXorf49A8MYA2 514 aaPredicted RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 YY2O15391 372 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 GLRA3O75311 464 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 FAM155BO75949 473 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 MTHFD1P11586 935 aaKnown RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 GLB1P16278 677 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ZNF37AP17032 561 aaPredicted RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 TAC1P20366 129 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SAT1P21673 171 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SHMT2P34897 504 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 FASLGP48023 281 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CLCN7P51798 805 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 GPLD1P80108 840 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 DAB2P98082 770 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 E2F1Q01094 437 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 PRKAA1Q13131 559 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ARHGAP19Q14CB8 494 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ACAP2Q15057 778 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ZKSCAN8Q15776 578 aaPredicted RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CCDC153Q494R4 210 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 C14orf28Q4W4Y0 310 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CTSL3PQ5NE16 218 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CEP85LQ5SZL2 805 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ARMC6Q6NXE6 501 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 METTL2BQ6P1Q9 378 aaKnown RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 IYDQ6PHW0 289 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 OGFOD3Q6PK18 319 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SLC30A9Q6PML9 568 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 C11orf96Q7Z7L8 435 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 LDB1Q86U70 411 aaPredicted RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ZNF547Q8IVP9 402 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 DCUN1D3Q8IWE4 304 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 UNC5BQ8IZJ1 945 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 KIRREL3Q8IZU9 778 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 IQCKQ8N0W5 287 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CARFQ8N187 725 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 PELI3Q8N2H9 469 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 DCLK2Q8N568 766 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ACVR1CQ8NER5 493 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 OR5K2Q8NHB8 316 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 RHEBL1Q8TAI7 183 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CD200R1Q8TD46 325 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 DCAKDQ8WVC6 231 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ISL2Q96A47 359 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ATXN7L3BQ96GX2 97 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 TRIM56Q9BRZ2 755 aaKnown RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 MCMBPQ9BTE3 642 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 PCBD2Q9H0N5 130 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 PLAC1Q9HBJ0 212 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SSU72Q9NP77 194 aaKnown RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SNX15Q9NRS6 342 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 IL1RAPL1Q9NZN1 696 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 SPATA7Q9P0W8 599 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 CTNNAL1Q9UBT7 734 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 FTSJ1Q9UET6 329 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 LGALS13Q9UHV8 139 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 GRID1Q9ULK0 1009 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 KCNK6Q9Y257 313 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ASF1AQ9Y294 204 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 DNAJC16Q9Y2G8 782 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 ADAMTS9Q9P2N4 1935 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
SSBP3-211ENST00000528787 KNL1Q8NG31 2342 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 A0A096LPK6 155 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 TRIM49D1C9J1S8 452 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 GPR39O43194 453 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 GFRA3O60609 400 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 SNX2O60749 519 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 NIPSNAP2O75323 286 aa7.75□□□□□ -1.17
SSBP3-211ENST00000528787 IPO13O94829 963 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms