RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 LEFTY2O00292 366 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 PRR35P0CG20 571 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 IRF1P10914 325 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 HRH2P25021 359 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 DCKP27707 260 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 POLR2IP36954 125 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 RPS9P46781 194 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 TBX4P57082 545 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 UFM1P61960 85 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 ZNF77Q15935 545 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 ABRAXAS1Q6UWZ7 409 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 USP51Q70EK9 711 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 PATL1Q86TB9 770 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 TANKQ92844 425 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 IGSF8Q969P0 613 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 MYEOVQ96EZ4 313 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 NECTIN4Q96NY8 510 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 KCTD14Q9BQ13 255 aaPredicted RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 AARSD1Q9BTE6 412 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 TFB2MQ9H5Q4 396 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 PIF1Q9H611 641 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 CD320Q9NPF0 282 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 INTS7Q9NVH2 962 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
RBM39-243ENST00000528062 GDE1Q9NZC3 331 aa12.82□□□□□ -0.36
RBM39-243ENST00000528062 CROCCQ5TZA2 2017 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SUPT3HB4E1H0 165 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SUPT3HO75486 399 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 CYBBP04839 570 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 LAMP2P13473 410 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 RHOQP17081 205 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 IL12AP29459 219 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 WEE1P30291 646 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 AGTR2P50052 363 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 RING1Q06587 406 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SMAD2Q15796 467 aaKnown RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 NADSYN1Q6IA69 706 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 UGT3A1Q6NUS8 523 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 PAQR3Q6TCH7 311 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 Q6ZNB5 142 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 KCTD8Q6ZWB6 473 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SYVN1Q86TM6 617 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 CROCCP3Q8IVE0 287 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 DHRSXQ8N5I4 330 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 PAPD5Q8NDF8 572 aaKnown RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 GPR150Q8NGU9 434 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 OR2T11Q8NH01 316 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 FGF14Q92915 247 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 FATE1Q969F0 183 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SEMA3CQ99985 751 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 RPP25Q9BUL9 199 aaKnown RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 ZYG11BQ9C0D3 744 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 AIG1Q9NVV5 245 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 COL4A2P08572 1712 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 CDC7O00311 574 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 GIPC1O14908 333 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 ZSCAN9O15535 394 aaPredicted RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 B4GAT1O43505 415 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 KERAO60938 352 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 ECI2O75521 394 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 C7P10643 843 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 IL9P15248 144 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 CASP2P42575 452 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 ADARB1P78563 741 aaKnown RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 TSNQ15631 228 aaKnown RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 TANGO2Q6ICL3 276 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 OGFOD2Q6N063 350 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 FBXO39Q8N4B4 442 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SMYD1Q8NB12 490 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 TBC1D15Q8TC07 691 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SMARCD2Q92925 531 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 FAM210AQ96ND0 272 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 PLEKHG4BQ96PX9 1271 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 ACOX2Q99424 681 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 SEPHS2Q99611 448 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 C1orf50Q9BV19 199 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 PLA2G2FQ9BZM2 168 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 FAIMQ9NVQ4 179 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 CFAP97Q9P2B7 532 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 GALPQ9UBC7 116 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 ZNF639Q9UID6 485 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 ANAPC2Q9UJX6 822 aa12.81□□□□□ -0.36
RBM39-243ENST00000528062 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
RBM39-243ENST00000528062 NCF1BA6NI72 391 aaPredicted RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 NCF1CA8MVU1 366 aaPredicted RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 C2CD4DB7Z1M9 353 aa12.8□□□□□ -0.36
RBM39-243ENST00000528062 EEDO75530 441 aaKnown RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 RPP40O75818 363 aaKnown RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 HNRNPCP07910 306 aaKnown RBP eCLIP12.8□□□□□ -0.366e-7■□□□□ 9.6
RBM39-243ENST00000528062 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 FCGR1AP12314 374 aa12.8□□□□□ -0.36
RBM39-243ENST00000528062 NCF1P14598 390 aaPredicted RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 CORO1AP31146 461 aaKnown RBP12.8□□□□□ -0.36
RBM39-243ENST00000528062 ACVRL1P37023 503 aa12.8□□□□□ -0.36
RBM39-243ENST00000528062 STC1P52823 247 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms