RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ARSGQ96EG1 525 aa2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 SLC39A13Q96H72 371 aa2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 GAL3ST4Q96RP7 486 aa2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 PITPNM3Q9BZ71 974 aa2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 FBXL17Q9UF56 701 aa2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 DBNLQ9UJU6 430 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 FBXW11Q9UKB1 542 aa2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 LAS1LQ9Y4W2 734 aaKnown RBP2.17□□□□□ -2.06
ECHDC1-219ENST00000526299 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 TNFSF14O43557 240 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 PRKRAO75569 313 aaKnown RBP2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 SLC25A12O75746 678 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 GPIP06744 558 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 GP9P14770 177 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 HLCSP50747 726 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 PAX9P55771 341 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 GSCP56915 257 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 ZBED6P86452 979 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 TAF13Q15543 124 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 NAB2Q15742 525 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 MEP1AQ16819 746 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 DMKNQ6E0U4 476 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 NIPA2Q8N8Q9 360 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 RFT1Q96AA3 541 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 PRICKLE1Q96MT3 831 aaPredicted RBP2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 RTN4RQ9BZR6 473 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 TSPYL4Q9UJ04 414 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 TBX20Q9UMR3 447 aa2.16□□□□□ -2.06
ECHDC1-219ENST00000526299 ASB14A6NK59 587 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 EIF3FO00303 357 aaPredicted RBP2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 MAP2K7O14733 419 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 HPRP00739 348 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 PRKACGP22612 351 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 ARL1P40616 181 aaPredicted RBP2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 TAS2R40P59535 323 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 LY6DQ14210 128 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 MVPQ14764 893 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 BAK1Q16611 211 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 PRICKLE4Q2TBC4 344 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 MOGAT2Q3SYC2 334 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 KLHL26Q53HC5 615 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 TPRG1Q6ZUI0 275 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 MARVELD2Q8N4S9 558 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 SAMD3Q8N6K7 520 aa2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 DAZLQ92904 295 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 PDLIM5Q96HC4 596 aaKnown RBP2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 SEPT5Q99719 369 aaPredicted RBP2.15□□□□□ -2.07
ECHDC1-219ENST00000526299 LOC101059948A0A1B0GTJ6 334 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 A0A1W2PRB8 838 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 A0A1W2PRG0 241 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 ACOD1A6NK06 481 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 MPTX1A8MV57 137 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 IPO7O95373 1038 aaKnown RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 PRB2P02812 416 aaPredicted RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 MELTFP08582 738 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 CYP2A7P20853 494 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 CNTFP26441 200 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 HALP42357 657 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 RARSP54136 660 aaKnown RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 TMEM50BP56557 158 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 PPFIA1Q13136 1202 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 EIF4EBP2Q13542 120 aaPredicted RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 CAPRIN1Q14444 709 aaKnown RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 TAF12Q16514 161 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 DPCR1Q3MIW9 517 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 C10orf62Q5T681 223 aaPredicted RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 CNTROBQ8N137 903 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 MAPKAPK5-AS1Q8N8E1 139 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 ATP8B4Q8TF62 1192 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 SMARCE1Q969G3 411 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 RNF125Q96EQ8 232 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 SGK494Q96LW2 274 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 SLA2Q9H6Q3 261 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 GNB4Q9HAV0 340 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 A4GALTQ9NPC4 353 aa2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 TRMT1Q9NXH9 659 aaKnown RBP2.14□□□□□ -2.07
ECHDC1-219ENST00000526299 MED19A0JLT2 244 aaPredicted RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 ELOVL7A1L3X0 281 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 C15orf61A6NNL5 157 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 E9PI62 339 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 SMAD9O15198 467 aaKnown RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 PAGE4O60829 102 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 TMCC2O75069 709 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 DAB1O75553 588 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 HIST1H2ABP04908 130 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 HIST1H2ADP20671 130 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 PIK3R1P27986 724 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 MTHFRP42898 656 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 MSH2P43246 934 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 MAPK9P45984 424 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 LEPRP48357 1165 aaKnown RBP2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 PRKCZQ05513 592 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 ADIPOQQ15848 244 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 CCNG2Q16589 344 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 ADALQ6DHV7 355 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 SEPT14Q6ZU15 432 aa2.13□□□□□ -2.07
ECHDC1-219ENST00000526299 RAPH1Q70E73 1250 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms