RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 YIPF1Q9Y548 306 aa7.73□□□□□ -1.17
SPIDR-223ENST00000524033 HEMK1Q9Y5R4 338 aaPredicted RBP7.73□□□□□ -1.17
SPIDR-223ENST00000524033 SNX13Q9Y5W8 968 aa7.73□□□□□ -1.17
SPIDR-223ENST00000524033 TDRD15B5MCY1 1934 aaKnown RBP7.73□□□□□ -1.17
SPIDR-223ENST00000524033 hCG_2014768A0A024R1R8 64 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 A0A0J9YYE9 177 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ASPDHA6ND91 283 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SAC3D1A6NKF1 404 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 H3BMQ9 156 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 MAN2B1O00754 1011 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ARPC2O15144 300 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 MAGEB3O15480 346 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 FGF10O15520 208 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SLC7A4O43246 635 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 PFDN1O60925 122 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 FGF19O95750 216 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CYP11A1P05108 521 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 GNAO1P09471 354 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 FCGR1AP12314 374 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 NELFEP18615 380 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SAT1P21673 171 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 FDXRP22570 491 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SLC6A2P23975 617 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 YWHAQP27348 245 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 HMOX2P30519 316 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CAPGP40121 348 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 GRIA3P42263 894 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CHRNA4P43681 627 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 RPS9P46781 194 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 STT3AP46977 705 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 HLCSP50747 726 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TIAL1Q01085 375 aaKnown RBP eCLIP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 PLOD1Q02809 727 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ACVR1Q04771 509 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 INPP5AQ14642 412 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ZNF528Q3MIS6 628 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 AARS2Q5JTZ9 985 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TMTC4Q5T4D3 741 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TIGD7Q6NT04 549 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 VITQ6UXI7 678 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CYP2R1Q6VVX0 501 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 RPS27LQ71UM5 84 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TRIM74Q86UV6 250 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TRIM73Q86UV7 250 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ITIH5Q86UX2 942 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CAMK1DQ8IU85 385 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CLVS1Q8IUQ0 354 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 YAF2Q8IY57 180 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TMEM86AQ8N2M4 240 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 VWA5B2Q8N398 1253 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CBR4Q8N4T8 237 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ATPAF2Q8N5M1 289 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 PCYOX1LQ8NBM8 494 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TRPV3Q8NET8 790 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 IPMKQ8NFU5 416 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 OR13J1Q8NGT2 312 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 DNASE1L2Q92874 299 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 BORCS5Q969J3 196 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 PTERQ96BW5 349 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CENPNQ96H22 339 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 VPS50Q96JG6 964 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 COG8Q96MW5 612 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TMEM209Q96SK2 561 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 PKMYT1Q99640 499 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TUBA1CQ9BQE3 449 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 MED10Q9BTT4 135 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 LRRC3Q9BY71 257 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 RBCK1Q9BYM8 510 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 UNKQ9C0B0 810 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SLC39A8Q9C0K1 460 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ATXN3LQ9H3M9 355 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 AKTIPQ9H8T0 292 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 POPDC3Q9HBV1 291 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 FBRSL1Q9HCM7 1045 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CYP4F12Q9HCS2 524 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 ZNF334Q9HCZ1 680 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 TRPV5Q9NQA5 729 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SDR39U1Q9NRG7 319 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 OR12D3Q9UGF7 316 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 SFMBT1Q9UHJ3 866 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CDH9Q9ULB4 789 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 NDRG2Q9UN36 371 aaKnown RBP7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CDC14AQ9UNH5 594 aa7.72□□□□□ -1.17
SPIDR-223ENST00000524033 CACNA1HO95180 2353 aa7.71□□□□□ -1.17
SPIDR-223ENST00000524033 MTMR11A4FU01 709 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 MROH6A6NGR9 719 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 HEPACAM2A8MVW5 462 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 TMX2-CTNND1H3BSU7 103 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 GPC4O75487 556 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 SOAT2O75908 522 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 CDK14O94921 469 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 PRSS23O95084 383 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 MMP2P08253 660 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 USP17L7P0C7H9 530 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 FAM157BP0CG42 384 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 UMPSP11172 480 aa7.71□□□□□ -1.18
SPIDR-223ENST00000524033 NCAM1P13591 858 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms