RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 RAPGEF1Q13905 1077 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 MORC3Q14149 939 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 HLTFQ14527 1009 aaKnown RBP eCLIP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 GBX1Q14549 363 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 POLD3Q15054 466 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 IRF4Q15306 451 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 KLHL40Q2TBA0 621 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 FAM214AQ32MH5 1076 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 LINC00303Q3SY05 128 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 SLC25A52Q3SY17 297 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 KHDC1Q4VXA5 237 aaKnown RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 RAB6CQ53S08 254 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 MANEAQ5SRI9 462 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ENPP7Q6UWV6 458 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ZNF783Q6ZMS7 281 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 MACC1Q6ZN28 852 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ZFAND4Q86XD8 727 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 XYLT1Q86Y38 959 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ZDHHC17Q8IUH5 632 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 EMC1Q8N766 993 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ARL10Q8N8L6 244 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ZBTB34Q8NCN2 500 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 TMEM35BQ8NCS4 154 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 DENND6BQ8NEG7 585 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 ZNF397Q8NF99 534 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 OR2AP1Q8NGE2 309 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 SNRNP27Q8WVK2 155 aaKnown RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 SHC3Q92529 594 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 RAB7BQ96AH8 199 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 CENPTQ96BT3 561 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 C18orf8Q96DM3 657 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 SGF29Q96ES7 293 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 FAM81BQ96LP2 452 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 C1orf74Q96LT6 269 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 TIGD1Q96MW7 591 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 LENG8Q96PV6 779 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 NCAPGQ9BPX3 1015 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 C1QTNF7Q9BXJ2 289 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 RAB6CQ9H0N0 254 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 PIEZO2Q9H5I5 2752 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 SUDS3Q9H7L9 328 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 NYNRINQ9P2P1 1898 aaKnown RBP5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 IL17BQ9UHF5 180 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 HPCAL4Q9UM19 191 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 LOXL2Q9Y4K0 774 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 MYO18BQ8IUG5 2567 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 COL6A6A6NMZ7 2263 aa5.27□□□□□ -1.57
CTNNA1-239ENST00000523685 NAV2Q8IVL1 2488 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 ATMQ13315 3056 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 IGLV3-10A0A075B6K4 115 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PRAMEF33A0A0G2JMD5 474 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 A0A1W2PQM1 296 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 B4DGG1 531 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 NTN3O00634 580 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 FOXS1O43638 330 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PRAMEF10O60809 474 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 RAMP2O60895 175 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 TMCC1O94876 653 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 UBXN7O94888 489 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PIGNO95427 931 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 POP4O95707 220 aaKnown RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 CD160O95971 181 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 GSRP00390 522 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PRKCGP05129 697 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PCCBP05166 539 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 ALPIP09923 528 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 HOXA5P20719 270 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 MSX2P35548 267 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 BLKP51451 505 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 HK3P52790 923 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 GEMIN4P57678 1058 aaKnown RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 RHOAP61586 193 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 YPEL5P62699 121 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 TLE1Q04724 770 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 RAD51Q06609 339 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 FOXL1Q12952 345 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 GRM3Q14832 879 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 ELOCQ15369 112 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 TPD52L1Q16890 204 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 C15orf59Q2T9L4 293 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 ALG11Q2TAA5 492 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 HSP90AA4PQ58FG1 418 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 CFAP58Q5T655 872 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 NAA35Q5VZE5 725 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 AFMIDQ63HM1 303 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 TRNP1Q6NT89 227 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 GDPD4Q6W3E5 623 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 TAF8Q7Z7C8 310 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 ZSCAN30Q86W11 494 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 GKN2Q86XP6 184 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 SFTPA2Q8IWL1 248 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 D2HGDHQ8N465 521 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 FSTL5Q8N475 847 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PAF1Q8N7H5 531 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 PPP1R35Q8TAP8 253 aa5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 ARHGEF2Q92974 986 aaKnown RBP5.26□□□□□ -1.57
CTNNA1-239ENST00000523685 NT5C3BQ969T7 300 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms