RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	EBLN1	P0CF75	366 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	MSN	P26038	577 aa	Known RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	FOXN2	P32314	431 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	FDFT1	P37268	417 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	ARCN1	P48444	511 aa	Known RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	KPNA2	P52292	529 aa	Known RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	CDH17	Q12864	832 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	SEMA5A	Q13591	1074 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	GSE1	Q14687	1217 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	RPS6KA1	Q15418	735 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	SKIDA1	Q1XH10	827 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	KMT5C	Q86Y97	462 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	RASGRP3	Q8IV61	690 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	D2HGDH	Q8N465	521 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	SIDT2	Q8NBJ9	832 aa	Known RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	PHC3	Q8NDX5	983 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	OR4E2	Q8NGC2	313 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	PPM1M	Q96MI6	270 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	ZNF778	Q96MU6	729 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	CASS4	Q9NQ75	786 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	SLC2A6	Q9UGQ3	507 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	HEBP2	Q9Y5Z4	205 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	PRSS21	Q9Y6M0	314 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	COLEC10	Q9Y6Z7	277 aa		12.05	□□□□□ -0.48
VEGFA-223	ENST00000523125	FER1L5	A0AVI2	2057 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	AP2A2	O94973	939 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	IFNB1	P01574	187 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	ZSCAN5DP	P0CG00	497 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	PRKAR1A	P10644	381 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	POLR2C	P19387	275 aa	Predicted RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	NDUFS1	P28331	727 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	OAS2	P29728	719 aa	Known RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	RPL22	P35268	128 aa	Known RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	PREP	P48147	710 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	CD151	P48509	253 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	HSD11B2	P80365	405 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	ACVR1	Q04771	509 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	CDC20	Q12834	499 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	NFATC3	Q12968	1075 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	RPA4	Q13156	261 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	TUBB3	Q13509	450 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	BOP1	Q14137	746 aa	Known RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	CCNG2	Q16589	344 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	CRTC2	Q53ET0	693 aa	Predicted RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	PWWP2B	Q6NUJ5	590 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	BORA	Q6PGQ7	559 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	FBXO38	Q6PIJ6	1188 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	PACS1	Q6VY07	963 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	OOSP2	Q86WS3	158 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	PPP1R3B	Q86XI6	285 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	DNAAF3	Q8N9W5	541 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	ACVR1C	Q8NER5	493 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	STARD8	Q92502	1023 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	HDAC10	Q969S8	669 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	FERD3L	Q96RJ6	166 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	RANBP9	Q96S59	729 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	EFHD1	Q9BUP0	239 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	LZTFL1	Q9NQ48	299 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	RAB6B	Q9NRW1	208 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	FGF21	Q9NSA1	209 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	GEMIN8	Q9NWZ8	242 aa	Known RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	SMARCAL1	Q9NZC9	954 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	LNPEP	Q9UIQ6	1025 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	CROT	Q9UKG9	612 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	POMT2	Q9UKY4	750 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	RIMKLB	Q9ULI2	386 aa		12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	MRPS18B	Q9Y676	258 aa	Known RBP	12.04	□□□□□ -0.48
VEGFA-223	ENST00000523125	SEC16A	O15027	2179 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	UBA6	A0AVT1	1052 aa	Predicted RBP	12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	HEATR9	A2RTY3	570 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	BTN3A3	O00478	584 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	ZBTB11	O95625	1053 aa	Predicted RBP	12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	GSTM1	P09488	218 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	CCDC175	P0C221	793 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	SFTPC	P11686	197 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	DLST	P36957	453 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	NSG1	P42857	185 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	CCZ1B	P86790	482 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	CCZ1	P86791	482 aa	Predicted RBP	12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	GSTM4	Q03013	218 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	KRT33B	Q14525	404 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	ITIH4	Q14624	930 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	GPR19	Q15760	415 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	TSTD2	Q5T7W7	516 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	ATP1A1-AS1	Q5TC04	95 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	ZNF534	Q76KX8	674 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	BPHL	Q86WA6	291 aa	Predicted RBP	12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	LRRC8A	Q8IWT6	810 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	CARF	Q8N187	725 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	STAMBPL1	Q96FJ0	436 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	CATSPER2	Q96P56	530 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	FCRL4	Q96PJ5	515 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	ALS2CR12	Q96Q35	445 aa		12.03	□□□□□ -0.48
VEGFA-223	ENST00000523125	TLR10	Q9BXR5	811 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms