RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	SNPH	O15079	494 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ICAM2	P13598	275 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	C5AR1	P21730	350 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ATP5F1	P24539	256 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	UGT2B15	P54855	530 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	PKNOX1	P55347	436 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CDC42	P60953	191 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MEF2A	Q02078	507 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ARHGAP1	Q07960	439 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	FRG1	Q14331	258 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TAF5	Q15542	800 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ZACN	Q401N2	412 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	LDLRAD1	Q5T700	205 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TMEM220	Q6QAJ8	160 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	EIF3M	Q7L2H7	374 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	RALGPS2	Q86X27	583 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ARL5B	Q96KC2	179 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	SLC4A5	Q9BY07	1137 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	DHX33	Q9H6R0	707 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ELL3	Q9HB65	397 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	HPS4	Q9NQG7	708 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ACSS2	Q9NR19	701 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	STXBP5L	Q9Y2K9	1186 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MRAS	O14807	208 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MYL12B	O14950	172 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	EPHB6	O15197	1021 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TGDS	O95455	350 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ADRA1B	P35368	520 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	RUNX3	Q13761	415 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TAB1	Q15750	504 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	PLA2G4E	Q3MJ16	856 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	LRIF1	Q5T3J3	769 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	KRT74	Q7RTS7	529 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	BNIPL	Q7Z465	357 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	RTL3	Q8N8U3	475 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	SNIP1	Q8TAD8	396 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	NANOS1	Q8WY41	292 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CENPI	Q92674	756 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	IER2	Q9BTL4	223 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CADM1	Q9BY67	442 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	SLC25A51	Q9H1U9	297 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	RASSF1	Q9NS23	344 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TRIM38	O00635	465 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CNTN5	O94779	1100 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	LINGO3	P0C6S8	592 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CCT3	P49368	545 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CASP9	P55211	416 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	BST1	Q10588	318 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	DCST1	Q5T197	706 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	LCTL	Q6UWM7	567 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MMAA	Q8IVH4	418 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ACMSD	Q8TDX5	336 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	SNX33	Q8WV41	574 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	NACC2	Q96BF6	587 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ERLEC1	Q96DZ1	483 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	OR2M4	Q96R27	311 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	GPATCH1	Q9BRR8	931 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	DGCR6L	Q9BY27	220 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ZNF576	Q9H609	170 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	METTL7A	Q9H8H3	244 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ABCB10	Q9NRK6	738 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TAS2R14	Q9NYV8	317 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	N6AMT1	Q9Y5N5	214 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MRC1	P22897	1456 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	GJE1	A6NN92	205 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	PSMD11	O00231	422 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ZNF208	O43345	1280 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	RHO	P08100	348 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	DLD	P09622	509 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CTSA	P10619	480 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	SLC11A1	P49279	550 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ZNF41	P51814	821 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	TAF1A	Q15573	450 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	FUT11	Q495W5	492 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	INO80D	Q53TQ3	878 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	C10orf62	Q5T681	223 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	EEF1DP3	Q658K8	133 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MZT2A	Q6P582	158 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	FAM180A	Q6UWF9	173 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	CYP2R1	Q6VVX0	501 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	THAP5	Q7Z6K1	395 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	GATAD2B	Q8WXI9	593 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	NCSTN	Q92542	709 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	MRPL57	Q9BQC6	102 aa	Known RBP	10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ACTL8	Q9H568	366 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653	ETNK2	Q9NVF9	386 aa		10.19	□□□□□ -0.78
TCF7-223	ENST00000522653		H3BN98	237 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	FAM20B	O75063	409 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	ITGA3	P26006	1051 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	IL12A	P29459	219 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	GSTM5	P46439	218 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	GRIA4	P48058	902 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	MZT1	Q08AG7	82 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	PWP1	Q13610	501 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	NDUFAF6	Q330K2	333 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	C2CD6	Q53TS8	623 aa		10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	EARS2	Q5JPH6	523 aa	Known RBP	10.18	□□□□□ -0.78
TCF7-223	ENST00000522653	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms